Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02174 and BPUM_1179
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:37
# Commandline: needle
# -asequence pep-align/BSNT_02174___ykbA.1.24716.seq
# -bsequence pep-align/BPUM_1179___potE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02174___ykbA-BPUM_1179___potE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02174___ykbA-BPUM_1179___potE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02174___ykbA
# 2: BPUM_1179___potE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 441
# Identity: 339/441 (76.9%)
# Similarity: 389/441 (88.2%)
# Gaps: 3/441 ( 0.7%)
# Score: 1766.5
#
#
#=======================================
BSNT_02174___ 1 MHSEDNGLKKEIGLLFALTLVIGTIIGSGVFMKPGAVLAYSGDSKMALFA 50
|:.|...||::|||.|||:||||||||||||||||.||:|||.|.:||||
BPUM_1179___p 1 MNKEQPALKQDIGLFFALSLVIGTIIGSGVFMKPGNVLSYSGSSDIALFA 50
BSNT_02174___ 51 WLLGGILTLAGGLTIAEIGTQIPKTGGLYTYLEEVYGEFWGFLCGWVQII 100
||||||||||||||:||||||||:|||||.|||||||||||:||||||||
BPUM_1179___p 51 WLLGGILTLAGGLTVAEIGTQIPRTGGLYAYLEEVYGEFWGYLCGWVQII 100
BSNT_02174___ 101 IYGPAIIGALGLYFGSLMANLFGWGSGLSKVIGIIAVLFLCVINIIGTKY 150
|||||||||||||||||:||||...|..|..||||.|||||:|||:||||
BPUM_1179___p 101 IYGPAIIGALGLYFGSLLANLFSLSSLWSTTIGIITVLFLCLINIMGTKY 150
BSNT_02174___ 151 GGFVQTLTTIGKLIPIACIIIFGLWKGDQHIFTAVNESISDMNFGAAILA 200
|||||.|||||||:|||.||:||||||:::|..|||:||:.|||||||||
BPUM_1179___p 151 GGFVQGLTTIGKLVPIAAIIVFGLWKGNENILMAVNDSIAQMNFGAAILA 200
BSNT_02174___ 201 TLFAYDGWILLAALGGEMKNPEKLLPRAMTGGLLIVTAIYIFINFALLHI 250
|||||||||||||||||||||||||||||.||:|||||.|:|||.||||:
BPUM_1179___p 201 TLFAYDGWILLAALGGEMKNPEKLLPRAMAGGILIVTACYLFINVALLHV 250
BSNT_02174___ 251 LSANEIVTLGENATSTAATMLFGSIGGKLISVGIIVSIFGCLNGKVLSFP 300
|.|::||.|||||||||||||||.||||:||:|||:||||||||||||||
BPUM_1179___p 251 LPADQIVQLGENATSTAATMLFGPIGGKVISIGIIISIFGCLNGKVLSFP 300
BSNT_02174___ 301 RVSFAMAERKQLPFAEKLSHVHPSFRTPWIAISFQIALALIMMLISNPDK 350
||.||||||||:|||..:|.:||:|:|||||:..||.:|::.|::|||:|
BPUM_1179___p 301 RVIFAMAERKQIPFANAISRIHPTFKTPWIAVFVQILIAIVFMIVSNPEK 350
BSNT_02174___ 351 LSEISIFMIYIFYVMAFFAVFILRKRAKGKKRAYSVPLYPFMPILAIAGS 400
|||:|||||||||||||||||.|||:.||.:|||||||||..||:||.||
BPUM_1179___p 351 LSEVSIFMIYIFYVMAFFAVFKLRKQNKGIERAYSVPLYPLTPIVAIIGS 400
BSNT_02174___ 401 FFVLGSTLITDTMSCGLSILIGLAGLPVYYGMKK--RKAS- 438
.|||.||:|||..||.:|:|||:||||:||.||: :||.
BPUM_1179___p 401 LFVLISTMITDWKSCLISMLIGIAGLPLYYYMKRAHKKAER 441
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