Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03052 and BPUM_1170
See
DNA alignment /
Visit
BSNT_03052 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:34
# Commandline: needle
# -asequence pep-align/BSNT_03052___yogA.1.24716.seq
# -bsequence pep-align/BPUM_1170___gutB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03052___yogA-BPUM_1170___gutB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03052___yogA-BPUM_1170___gutB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03052___yogA
# 2: BPUM_1170___gutB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 369
# Identity: 88/369 (23.8%)
# Similarity: 154/369 (41.7%)
# Gaps: 66/369 (17.9%)
# Score: 198.0
#
#
#=======================================
BSNT_03052___ 1 MKAVIHNGKAGLLGLSVQDV---PSTKPGYG--EVKVKLKSAGLNHRDLF 45
||:.:. .|.:|: ...:|..| ||.:::::.||...|::
BPUM_1170___g 1 MKSAVF--------YSSEDIRYEKRNRPAIGDDEVLLRMRACGLCGTDIY 42
BSNT_03052___ 46 LMKNKSEQDPHMILGSDGAGIIEEIGEGVKNVTVQTEVVI---FPTLNWD 92
...::: ..|..:||.:.||.|.|.|:.|.|:.....|.: .|....|
BPUM_1170___g 43 KATHET-VPPGTVLGHEIAGDIVETGKYVTNIKTGDRVYVAHHVPCFTCD 91
BSNT_03052___ 93 LTE-------------NVPPVPEILGGPSDGTLAEYVIIPSQNAI----K 125
..: ||.| |..:||:.:|:.:.. |
BPUM_1170___g 92 FCQRGFYTMCPQFSATNVDP----------GGFSEYIRVPALHVKHTMGK 131
BSNT_03052___ 126 KPAYLSWEEAGVLPLSALTAYRALFTKGQLKKGEHLLIPGIGSGVATYAL 175
.|..:|:|:..::...|...:. |.:..:..|:.:||.|.|. :....|
BPUM_1170___g 132 LPNDVSYEQGAMVEPVACCLHG--FERAPVHPGDSVLILGAGQ-IGCIQL 178
BSNT_03052___ 176 FMAK-AIGATVSVTSRSEEKRKKALKLGADYAFDSYSNWDE-----QLQG 219
.:|| .:...:.:|..:|.:..:|..||||.||...|...| :..|
BPUM_1170___g 179 QLAKHYLAGKIMITDVNENRLLQARNLGADVAFHPASEPVEDRVMRETNG 228
BSNT_03052___ 220 KKADVVLDSIG-PALFSEYFRHVKPNGRIVSFGASSGDNLSFPVRSLFFP 268
|.||:|:.|:| .||..|.|:.|...|.|:.|......::|.|....|..
BPUM_1170___g 229 KGADLVIISVGSSALLKEAFQAVARGGTILVFAHFPKGDVSIPADRFFHD 278
BSNT_03052___ 269 QVNVLGTSMGSGEEFQAMLAFIDKHKL---RPVIDRIYPLEKACEAYK-- 313
:|.|:|........:...|..: :.|: ..::...|||.:..:|.:
BPUM_1170___g 279 EVKVVGAYSSHPYHYLEALELL-RAKVVNTEKMVTHRYPLSQLLQAIECA 327
BSNT_03052___ 314 RMQEGRQFGNIGIVME--- 329
|..|| .::.|:|.
BPUM_1170___g 328 RHPEG---DSVKIMMYPDE 343
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.