Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02172 and BPUM_1161

See DNA alignment / Visit BSNT_02172 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:37
# Commandline: needle
#    -asequence pep-align/BSNT_02172___pit.1.24716.seq
#    -bsequence pep-align/BPUM_1161___pit.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02172___pit-BPUM_1161___pit.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02172___pit-BPUM_1161___pit.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02172___pit
# 2: BPUM_1161___pit
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity:     286/333 (85.9%)
# Similarity:   315/333 (94.6%)
# Gaps:           1/333 ( 0.3%)
# Score: 1482.0
# 
#
#=======================================

BSNT_02172___      1 MDILLILTILIVICALAFDFINGFHDTANAIATSVSTKALKPRHAIILAA     50
                     ||.||||||.|||||||||||||||||||||||||||||||||||||:||
BPUM_1161___p      1 MDTLLILTIFIVICALAFDFINGFHDTANAIATSVSTKALKPRHAIIMAA     50

BSNT_02172___     51 VMNFIGAMTFTGVAKTITKDIVDPYTLENGSVVILAALLAAIAWNLITWY    100
                     .|||:||||||||||:|||||.||:||:||||||||||:|||.|||:|||
BPUM_1161___p     51 FMNFLGAMTFTGVAKSITKDIADPFTLQNGSVVILAALIAAITWNLLTWY    100

BSNT_02172___    101 YGIPSSSSHAIIGAIAGAAIAAAGFAALNYKGFIKIIEALILSPIIAFVL    150
                     ||||||||||:||:||||.||:|||.||||.||||||:||:||||:||||
BPUM_1161___p    101 YGIPSSSSHALIGSIAGAVIASAGFGALNYSGFIKIIQALLLSPILAFVL    150

BSNT_02172___    151 GFILYSIVKLIFKDSNLAKTNKQFRRVQIVTAALQSYTHGTNDAQKAMGI    200
                     |:|:|:|||.||:::||:|||||||||||:||||||||||||||||||||
BPUM_1161___p    151 GYIVYTIVKFIFRNNNLSKTNKQFRRVQILTAALQSYTHGTNDAQKAMGI    200

BSNT_02172___    201 ITMALITANLHTSANDIPTWVQFACATAMGLGTSIGGWKIIKTVGGKIMK    250
                     ||||||..||||: :|||.||||:||.|||||||||||||||||||||||
BPUM_1161___p    201 ITMALIAGNLHTT-DDIPFWVQFSCALAMGLGTSIGGWKIIKTVGGKIMK    249

BSNT_02172___    251 IRPVNGVSADLTGAAIIFGATFIHLPVSTTHVISSSILGVGASHRVKGVN    300
                     |||||||||||||||||||||||||||||||||||||||||::|||||||
BPUM_1161___p    250 IRPVNGVSADLTGAAIIFGATFIHLPVSTTHVISSSILGVGSAHRVKGVN    299

BSNT_02172___    301 WGTAKRMLITWVITLPISATLGAIAYFILNMIF    333
                     ||||||||:|||||||||.||||:.||:||.|.
BPUM_1161___p    300 WGTAKRMLVTWVITLPISGTLGALIYFVLNAII    332


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.