Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02170 and BPUM_1160

See DNA alignment / Visit BSNT_02170 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:37
# Commandline: needle
#    -asequence pep-align/BSNT_02170___spoIISA.1.24716.seq
#    -bsequence pep-align/BPUM_1160___spoIISA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02170___spoIISA-BPUM_1160___spoIISA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02170___spoIISA-BPUM_1160___spoIISA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02170___spoIISA
# 2: BPUM_1160___spoIISA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 256
# Identity:     160/256 (62.5%)
# Similarity:   203/256 (79.3%)
# Gaps:           8/256 ( 3.1%)
# Score: 890.0
# 
#
#=======================================

BSNT_02170___      1 MVLFFQIMVWCIVAGLGLYVYATWRFEAKVKEKMSAIRKTWYLLFVLGAM     50
                     |:||||:.||.::..|.:||:|.||||.||||||.|||||||.::|.||:
BPUM_1160___s      1 MLLFFQLTVWLLLGALAVYVFAVWRFEQKVKEKMFAIRKTWYWIYVAGAV     50

BSNT_02170___     51 VYWTYEPTSLFTHWERYLIVAVSFALIDAFIFLSAYVKKLAGSELETDTR    100
                     ||||.:|:|:||.|..|||:||.|||.|||||||:|:|||...||||||.
BPUM_1160___s     51 VYWTNDPSSIFTDWMHYLIIAVFFALTDAFIFLSSYIKKLGNHELETDTH    100

BSNT_02170___    101 EILEENNEMLHMYLNRLKTYQYLLKNEPIHVYYGSIDAYAEGIDKLLKTY    150
                     ::||:||::||.|||:|||||||||||||||||||::||.|||::|:.::
BPUM_1160___s    101 QLLEQNNDLLHSYLNKLKTYQYLLKNEPIHVYYGSVEAYIEGIERLIYSF    150

BSNT_02170___    151 ADKMNLTASLCHYSTQADKDRLTEHMDDPADVQTRLDRKDVYYDQYGKVV    200
                     |||||:.|.||.|.||..||.|...:|..|.:|.:|||::||||.:||:|
BPUM_1160___s    151 ADKMNIQAVLCPYDTQEQKDDLLRTLDQRALIQAKLDRQEVYYDDFGKLV    200

BSNT_02170___    201 LIPFTIETQNYVIKLTSDSIVTEFDYLLFTSLTSIYDLVLPIEEEGEG--    248
                     ||||::...::|||||||.|||||||||.||||:||||:||.||||:.  
BPUM_1160___s    201 LIPFSVADDHFVIKLTSDDIVTEFDYLLMTSLTTIYDLILPDEEEGDEDG    250

BSNT_02170___    248 ------    248
                           
BPUM_1160___s    251 PRTSRG    256


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