Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02170 and BPUM_1160

See Amino acid alignment / Visit BSNT_02170 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:37
# Commandline: needle
#    -asequence dna-align/BSNT_02170___spoIISA.1.24716.seq
#    -bsequence dna-align/BPUM_1160___spoIISA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02170___spoIISA-BPUM_1160___spoIISA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02170___spoIISA-BPUM_1160___spoIISA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02170___spoIISA
# 2: BPUM_1160___spoIISA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 822
# Identity:     511/822 (62.2%)
# Similarity:   511/822 (62.2%)
# Gaps:         126/822 (15.3%)
# Score: 1486.0
# 
#
#=======================================

BSNT_02170___      1 ATGGTTTTATTCTTTCAGATCATGGTCTGG----TGCATCGTGGCCGGAC     46
                     |||.|.|||||.|||||..|.|..||.|||    |||...|||.||...|
BPUM_1160___s      1 ATGCTATTATTTTTTCAATTGACCGTGTGGTTATTGCTAGGTGCCCTTGC     50

BSNT_02170___     47 TGGGGTTATACGTGTATGCCACGTGGCGTTTCGAAGCGAAGGTCAAAGAA     96
                     ||    ||||.||.|.||||...||||||||.|||...||.||.||||||
BPUM_1160___s     51 TG----TATATGTATTTGCCGTATGGCGTTTTGAACAAAAAGTAAAAGAA     96

BSNT_02170___     97 AAAATGTCCGCCATCCGGAAAACTTGGTATTTGCTGTTTGT-TCTGGGCG    145
                     ||.||||..|||||.||.|||||.|||||||.|.|.|.||| .|| ||.|
BPUM_1160___s     97 AAGATGTTTGCCATTCGTAAAACGTGGTATTGGATTTATGTAGCT-GGTG    145

BSNT_02170___    146 CTATGGTATACTGGACATATGAGCCCACTTCCCTATTTACCCACTGG--G    193
                     ||.|.||.|||||||||.||||.||..||||..|.||.|||.|.|||  |
BPUM_1160___s    146 CTGTAGTGTACTGGACAAATGACCCTTCTTCAATCTTCACCGATTGGATG    195

BSNT_02170___    194 AACGGTATC----TCATTGTCGCAGTCAGTTTT----GCTTTGATTGATG    235
                     .||  || |    ||||||       |.|||||    ||..|.|..||||
BPUM_1160___s    196 CAC--TA-CTTAATCATTG-------CTGTTTTTTTCGCACTAACCGATG    235

BSNT_02170___    236 CTTTTATCTTCTTAAGTGCATACGTCAAAAAACTGGCCGG----CAGCGA    281
                     |.||.|||||..|.||..|.||..|.||||||||   |||    || |||
BPUM_1160___s    236 CATTCATCTTTCTCAGCTCCTATATTAAAAAACT---CGGAAATCA-CGA    281

BSNT_02170___    282 GCTTGAAACAGACACAAGAGAAATTCTTGAAGAAAACAACGAAATGCTCC    331
                     .||.|||||.|||||.....||.|.||.|||.||||.|||||..|.||.|
BPUM_1160___s    282 ACTAGAAACCGACACCCACCAACTCCTAGAACAAAATAACGATCTACTTC    331

BSNT_02170___    332 ACATGTACCTCAATCGGCTGAAAACATACCAATACCTATTGAAAAACGAA    381
                     |....|||||||||..|||.|||||.||||||||||||||||||||||||
BPUM_1160___s    332 ATTCTTACCTCAATAAGCTAAAAACGTACCAATACCTATTGAAAAACGAA    381

BSNT_02170___    382 CCGATCCATGTTTATTATGGAAGTATAGATGCTTATGCTGAAGGTATTGA    431
                     |||||.|||||.||||||||||||.||||.||.|||...||.||.|||| 
BPUM_1160___s    382 CCGATTCATGTATATTATGGAAGTGTAGAGGCATATATAGAGGGAATTG-    430

BSNT_02170___    432 TAAACTGCTGA---AAACCTATGCTGATAAAATGAACTT---AACGGCCT    475
                       |||.|||.|   |..|.|.|||.||.||.|||||..|   |.|||   
BPUM_1160___s    431 --AACGGCTCATTTATTCTTTTGCCGACAAGATGAATATTCAAGCGG---    475

BSNT_02170___    476 CTCTTTGCC---ACTATTCGACACAGGCTGATAAAGA---------CCGG    513
                     .||||||.|   ||.||   ||.||||...|.|||||         .|||
BPUM_1160___s    476 TTCTTTGTCCATACGAT---ACGCAGGAACAAAAAGATGACCTGCTGCGG    522

BSNT_02170___    514 ----TTAAC---CGAG--CATATGGATGATCCGGCAGATGTACAAACACG    554
                         ||.||   ||||  |.|||      ||.||||.|            
BPUM_1160___s    523 ACACTTGACCAGCGAGCTCTTAT------TCAGGCAAA------------    554

BSNT_02170___    555 GCTCGATCGAAAGGATGTTTATTACGACCAATACGGAAAAGTGGTTCTCA    604
                     |||.||..|..||||.||.|||||||||.|.|.|||.|||.||||.||||
BPUM_1160___s    555 GCTTGACAGGCAGGAAGTCTATTACGACGATTTCGGCAAATTGGTGCTCA    604

BSNT_02170___    605 TCCCCTTTACCATCGAGACACAGA-----ACTATGTCATCAAGCTGACGT    649
                     ||||.|||.|..|.|     |.||     |||..|||||.|||||.||.|
BPUM_1160___s    605 TCCCGTTTTCTGTAG-----CGGATGATCACTTCGTCATTAAGCTTACCT    649

BSNT_02170___    650 CTGACAGCATTGTCACGGAATTTGATTATTTGCTATTTACGTCATTAACG    699
                     ||||....||||||||.||.||.||.|||||..||.|.||||||.|.||.
BPUM_1160___s    650 CTGATGATATTGTCACTGAGTTCGACTATTTATTAATGACGTCACTTACA    699

BSNT_02170___    700 AGCATATATGATTTGGTGCTGCCAATTGAGGAGGAAGGTGA---------    740
                     |..||.|||||..|..|..||||....||.|||||||||||         
BPUM_1160___s    700 ACAATTTATGACCTAATCTTGCCTGACGAAGAGGAAGGTGATGAAGATGG    749

BSNT_02170___    741 ---------------AGGATAA    747
                                    .||||||
BPUM_1160___s    750 ACCACGCACTTCAAGGGGATAA    771


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02170 and BPUM_1160

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
