Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02169 and BPUM_1159

See DNA alignment / Visit BSNT_02169 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:37
# Commandline: needle
#    -asequence pep-align/BSNT_02169___spoIISB.1.24716.seq
#    -bsequence pep-align/BPUM_1159___spoIISB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02169___spoIISB-BPUM_1159___spoIISB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02169___spoIISB-BPUM_1159___spoIISB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02169___spoIISB
# 2: BPUM_1159___spoIISB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 56
# Identity:      32/56 (57.1%)
# Similarity:    40/56 (71.4%)
# Gaps:           0/56 ( 0.0%)
# Score: 164.0
# 
#
#=======================================

BSNT_02169___      1 MERAFQNRCEPRAAKPFKILKKRSTTSVASYQVSPHTARIFKENERLIDE     50
                     |:.|.|.....|...|||||||:...|:|.|:|||||.||||:||:|:||
BPUM_1159___s      1 MDHALQGDNNNRKKNPFKILKKKQHISMADYKVSPHTERIFKKNEQLLDE     50

BSNT_02169___     51 YKRKKA     56
                     ||.|:|
BPUM_1159___s     51 YKNKRA     56


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.