Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02169 and BPUM_1159
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:37
# Commandline: needle
# -asequence dna-align/BSNT_02169___spoIISB.1.24716.seq
# -bsequence dna-align/BPUM_1159___spoIISB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02169___spoIISB-BPUM_1159___spoIISB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02169___spoIISB-BPUM_1159___spoIISB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02169___spoIISB
# 2: BPUM_1159___spoIISB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 190
# Identity: 117/190 (61.6%)
# Similarity: 117/190 (61.6%)
# Gaps: 38/190 (20.0%)
# Score: 293.0
#
#
#=======================================
BSNT_02169___ 1 ATGGAACGTGCGTTTCAA---------AACAGAT-GCGAGCCCAGAGCGG 40
|||||.|..||..||||| |||| || ||.|| |.|
BPUM_1159___s 1 ATGGACCACGCACTTCAAGGGGATAACAACA-ATCGCAAG---AAA---- 42
BSNT_02169___ 41 CGAAGCCGTTTAAAATCCTGAA-AAAACGTTCAAC----CACCAGTGTCG 85
||.||.|||||.||..|.|| ||||.| |||| ||.|| ||.||
BPUM_1159___s 43 --AACCCATTTAAGATTTTAAAGAAAAAG--CAACATATCAGCA-TGGCG 87
BSNT_02169___ 86 CAAGCTATCAAGTCAGTCCGCATAC--AGCAAGAATCTTCAAAGAAAACG 133
.| .|||.|.||.||.||.||||| ||| |.||.||||||.|.||.|
BPUM_1159___s 88 GA--TTATAAGGTAAGCCCCCATACTGAGC--GTATTTTCAAAAAGAATG 133
BSNT_02169___ 134 AACGGCTGATTGACGAGTATAAACGAAAAAAA--GCATGA 171
|||.|||..|.||.||||||||| ||.|||| ||.|||
BPUM_1159___s 134 AACAGCTCTTGGATGAGTATAAA--AATAAAAGGGCTTGA 171
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