Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02167 and BPUM_1158

See DNA alignment / Visit BSNT_02167 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:37
# Commandline: needle
#    -asequence pep-align/BSNT_02167___xlyA.1.24716.seq
#    -bsequence pep-align/BPUM_1158___xlyA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02167___xlyA-BPUM_1158___xlyA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02167___xlyA-BPUM_1158___xlyA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02167___xlyA
# 2: BPUM_1158___xlyA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 302
# Identity:     202/302 (66.9%)
# Similarity:   234/302 (77.5%)
# Gaps:           8/302 ( 2.6%)
# Score: 1063.5
# 
#
#=======================================

BSNT_02167___      1 MVNIIQDFIPVGANNRPGYAMTPLYITVHNTANTAVGADAAAHARYLKNP     50
                     ||.|.|||||||..|||||||||.||||||||||:.||||.:||.|:|.|
BPUM_1158___x      1 MVQIYQDFIPVGNGNRPGYAMTPEYITVHNTANTSKGADAKSHAAYVKKP     50

BSNT_02167___     51 DTTTSWHFTVDDTEIYQHLPLNENGWHAGDGNGSGNRASIGIEICENADG    100
                     .|..||||||||.||:|||||||||||||||:|:|||.||||||||||||
BPUM_1158___x     51 TTEVSWHFTVDDHEIFQHLPLNENGWHAGDGHGNGNRKSIGIEICENADG    100

BSNT_02167___    101 DFAKATANAQWLIKTLMAEHNISLANVVPHKYWSGKECPRKLLDTWDSFK    150
                     :|.:|..:|||||:.|:.||:|.|||||.|:|||||.|||:||.||:.||
BPUM_1158___x    101 NFQQAVKHAQWLIQKLLNEHHIPLANVVTHQYWSGKACPRQLLSTWNEFK    150

BSNT_02167___    151 AGIGGGGSQ----TYVVKQGDTLTSIARAFGVTVAQLQEWNNIEDPNLIR    196
                     .||......    |||||.||||||||:|.||||..||:||:|.|||.|:
BPUM_1158___x    151 KGIETAEDPETVITYVVKSGDTLTSIAKAHGVTVQDLQKWNDISDPNKIQ    200

BSNT_02167___    197 VGQVLIVSAPSSAEEPELYPLPDGIIQLTTPYTSGEHVFQVQRALAALYF    246
                     :||||.:   ...:...||.||||:|::|:|.|.||||..||:||||:||
BPUM_1158___x    201 IGQVLKI---YRNDAKSLYNLPDGVIKVTSPLTKGEHVRLVQQALAAVYF    247

BSNT_02167___    247 YPDKGAVNNGIDGVYGPKTADAVARFQSVNGLTADGIYGPATKAKIAAQL    296
                     ||||.|.|.|||||||.|||:||||||.||||.:||:|||.||.|:...|
BPUM_1158___x    248 YPDKAAANKGIDGVYGEKTANAVARFQLVNGLPSDGVYGPKTKEKLLKLL    297

BSNT_02167___    297 S-    297
                     | 
BPUM_1158___x    298 SQ    299


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