Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02115 and BPUM_1157
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:33
# Commandline: needle
# -asequence pep-align/BSNT_02115___xkdA.1.24716.seq
# -bsequence pep-align/BPUM_1157___xkdA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02115___xkdA-BPUM_1157___xkdA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02115___xkdA-BPUM_1157___xkdA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02115___xkdA
# 2: BPUM_1157___xkdA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 199
# Identity: 107/199 (53.8%)
# Similarity: 142/199 (71.4%)
# Gaps: 18/199 ( 9.0%)
# Score: 573.0
#
#
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BSNT_02115___ 1 MGDYLSHLEEYVKNLYGRLGITSPHHIDMLKIAKDLDIWVHFEDMGSMMV 50
|..:|:||||.:|.||.:|.|:.|.:.:|.:||.:..:|||:|:.||||:
BPUM_1157___x 1 MTGFLTHLEEDIKRLYAQLQISGPAYREMQRIASEFRVWVHYEETGSMMI 50
BSNT_02115___ 51 KYDGMYSIVLNQKKSREEQWEDFGHELCHVLKHAGNHFQMNKLFRELQEF 100
::.|:|||:||:..|.||||:||.|||||||||.||||:|||||||||||
BPUM_1157___x 51 QHQGLYSIILNRSLSPEEQWQDFAHELCHVLKHTGNHFKMNKLFRELQEF 100
BSNT_02115___ 101 QANQFMYHFCVPTFMLLQMELPQWRSQALATIAAVFRVTKEFADKRLDMF 150
||.||||||||||||||:|:||..|.||:..||..|.||..||:|||.:|
BPUM_1157___x 101 QAKQFMYHFCVPTFMLLKMKLPTLRQQAILHIAQTFHVTWAFAEKRLALF 150
BSNT_02115___ 151 ERRKAGIQFQKRL-AYLLSHKRPNAYEEGDQQHLQVAEEKALYHIGKNI 198
|:|||||:||:.. :||:..:: |||::.:|..
BPUM_1157___x 151 EQRKAGIRFQQEFTSYLMKAEK-------------VAEKEVVYQT---- 182
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