Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04035 and BPUM_1155

See DNA alignment / Visit BSNT_04035 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:32
# Commandline: needle
#    -asequence pep-align/BSNT_04035.1.24716.seq
#    -bsequence pep-align/BPUM_1155.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04035-BPUM_1155.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04035-BPUM_1155.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04035
# 2: BPUM_1155
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 184
# Identity:      53/184 (28.8%)
# Similarity:    79/184 (42.9%)
# Gaps:          54/184 (29.3%)
# Score: 254.5
# 
#
#=======================================

BSNT_04035         1 MTIRFFHFCLPSPFIGFISSYHCFIKVILKKCKDHMNPIYSKMREKKGES     50
                                                               |:....|.
BPUM_1155          1 ------------------------------------------MQSYLEEF      8

BSNT_04035        51 HIKTRSNIPLIMFALLVFFGGAIYWMLFSLKNVPKGNLVQSVESPDGSYT    100
                     .:|.::.:.||:  ||:.|.|.|||..|||:.|..|..::|:.||||.|.
BPUM_1155          9 MLKKKTTLTLII--LLLSFAGIIYWKCFSLQGVSHGTFIRSISSPDGMYI     56

BSNT_04035       101 LNTYV-SENTLSLDAARGELVNEKTLVKRTIYWNYPDSRPAVTWVNHHTV    149
                     :|||. |...|..:|.|.|:.|:.|..|:||||.|||..|.:.|.|...|
BPUM_1155         57 INTYQHSGGKLKENAVRAEIENKLTHRKKTIYWKYPDKDPLIQWKNGQLV    106

BSNT_04035       150 KIGNQTLHLDTDETYDWRKDDHWIREEPPQASVR    183
                     :||::.|::...:|||:|.|.:..:         
BPUM_1155        107 QIGHEFLNVVKGDTYDYRFDQNKRK---------    131


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