Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02911 and BPUM_1146
See
DNA alignment /
Visit
BSNT_02911 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:28
# Commandline: needle
# -asequence pep-align/BSNT_02911___yncD.1.24716.seq
# -bsequence pep-align/BPUM_1146___alr2.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02911___yncD-BPUM_1146___alr2.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02911___yncD-BPUM_1146___alr2.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02911___yncD
# 2: BPUM_1146___alr2
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 395
# Identity: 304/395 (77.0%)
# Similarity: 344/395 (87.1%)
# Gaps: 2/395 ( 0.5%)
# Score: 1547.0
#
#
#=======================================
BSNT_02911___ 1 MMIKLCREVWIEVNLDAVKKNLRAIRRHIPHKSKIMAVVKANGYGHGSIE 50
|.||||||||||||||:|:|:.||:.|||.|||||||||||.|||||:|
BPUM_1146___a 1 -MKKLCREVWIEVNLDAIKRNIEAIQAHIPRKSKIMAVVKANAYGHGSVE 49
BSNT_02911___ 51 VARHALEHGASELAVASVEEGIVLRKAGITAPILVLGFTSLSCVKKSAAW 100
|||.|||.||:||||||:|||||||:|.|.|||||||||.|.|||::|||
BPUM_1146___a 50 VARQALESGATELAVASLEEGIVLRRAKIEAPILVLGFTPLDCVKRAAAW 99
BSNT_02911___ 101 NITLSAFQVDWMKEANEILEKEASANRLAIHINVDTGMGRLGVRTKEELL 150
.|.||..:.||:.||||||.:|.|..||.||:||||||||||||||||||
BPUM_1146___a 100 RIDLSGLREDWIVEANEILAEEESQRRLGIHVNVDTGMGRLGVRTKEELL 149
BSNT_02911___ 151 EVVKALKASKFLRWTGIFTHFSTADEPDTTLTKLQHEKFISFLSFLKKQG 200
.||:||:.|:.|||.|||||||||||||...|.|||..||.||.||||||
BPUM_1146___a 150 GVVEALEKSENLRWDGIFTHFSTADEPDPDFTLLQHSIFIDFLRFLKKQG 199
BSNT_02911___ 201 IELPTVHMCNTAAAIAFPEFSADMIRLGIGLYGLYPSAYIKQLNLVKLEP 250
|:||||||.||||||||||||||||||||||||||||.||:.|:.|:|||
BPUM_1146___a 200 IKLPTVHMNNTAAAIAFPEFSADMIRLGIGLYGLYPSQYIESLDAVQLEP 249
BSNT_02911___ 251 ALSLKARIAYVKTMRTEPRTVSYGATYVAEPNEVIATLPIGYADGYSRAL 300
|||||||||:||.|.||||||||||||||:.:|||||:||||||||||||
BPUM_1146___a 250 ALSLKARIAFVKEMVTEPRTVSYGATYVAKRDEVIATIPIGYADGYSRAL 299
BSNT_02911___ 301 SNRGFVLHRGKRVPVAGRVTMDMIMVSLGENGEGKQGDEVVIYGKQKGAE 350
|||||:|.||:|:|:||||||||.|:||||. :.|||:||||||:|||.|
BPUM_1146___a 300 SNRGFMLFRGERMPIAGRVTMDMTMISLGEM-KAKQGEEVVIYGRQKGGE 348
BSNT_02911___ 351 ISVDEVAEMLNTINYEVVSTLSRRIPRFYIRDGEIFKVSTPVLYV 395
|||||:|||||||||||::|||||:||||.|.|:|.|:||||:||
BPUM_1146___a 349 ISVDEIAEMLNTINYEVIATLSRRVPRFYRRGGKIIKISTPVMYV 393
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.