Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01163 and BPUM_1132
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:48
# Commandline: needle
# -asequence pep-align/BSNT_01163.1.24716.seq
# -bsequence pep-align/BPUM_1132___rapH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01163-BPUM_1132___rapH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01163-BPUM_1132___rapH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01163
# 2: BPUM_1132___rapH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 376
# Identity: 203/376 (54.0%)
# Similarity: 272/376 (72.3%)
# Gaps: 4/376 ( 1.1%)
# Score: 1065.5
#
#
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BSNT_01163 1 MSQAIPSSRVGVKINEWYKMIRQFSVPDAEVLKAEVEQDIQKMEEDQDLL 50
.:.:.||.|||||||||||||||||||||:|||||||:|::||||||||
BPUM_1132___r 1 -MEKVLSSHVGVKINEWYKMIRQFSVPDAEILKAEVEQEIERMEEDQDLL 49
BSNT_01163 51 IYYSLMCFRHQLMLDYLEPGQPYGNRPTVTELLETIETPQKKLTGLLKYY 100
|||.||||||||||||::|.:. ..|:|::|::.||....:|:|:|:||
BPUM_1132___r 50 IYYQLMCFRHQLMLDYIKPSEK--RSPSVSDLVDKIENSNHQLSGMLQYY 97
BSNT_01163 101 SLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDEIEKAEFHFKVAEAYY 150
:.||:||:||.:||||:||.||:.||::|..|.|:||:||||||||||||
BPUM_1132___r 98 NAFFKGMHEFSKKEYVQAIQYYKIAERQLALVVDDIEQAEFHFKVAEAYY 147
BSNT_01163 151 HMKQTHVSMHHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKAL 200
.|||||||||||::|||||:.|..|.:|.||||.|||||||||..|:|:|
BPUM_1132___r 148 IMKQTHVSMHHIIKALDIYKEHEQYRVRQIQSLIVIAGNYDDFMRYEKSL 197
BSNT_01163 201 PHLEKALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVS 250
.||:.|..:|:...:.|.:|.:||||.|:|||......|::|:::...:.
BPUM_1132___r 198 QHLKTAYSIAVGANDQRLVAKTLLNIGNTYDRQSRYTEAIKHYKEVLDII 247
BSNT_01163 251 REKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKEL 300
..:..|:.|..||.|.|:|.|:.||.:|...:||||.:.:..:......|
BPUM_1132___r 248 SSEKSDIKPITLFSLCWSLYKSNQTDEADLLVEEGLIYSSKVNDSLSVLL 297
BSNT_01163 301 FLFLQAVYKETVDERKIHDLLSYFEKKNLHAYIEACARSAAAVFESSCHF 350
|..|:|:|.:| ||:.:.::...||:|.||.|:||.|:|....:|....|
BPUM_1132___r 298 FKALKAIYMDT-DEQALKEVFDIFEEKKLHVYVEAFAQSVGLFYEKKGDF 346
BSNT_01163 351 EQAAAFYRKVLKAQEDILKGECLYAY 376
|:||.:|||.||||.||.||||||.|
BPUM_1132___r 347 EKAAEYYRKALKAQNDIQKGECLYDY 372
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