Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01163 and BPUM_1132

See DNA alignment / Visit BSNT_01163 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:48
# Commandline: needle
#    -asequence pep-align/BSNT_01163.1.24716.seq
#    -bsequence pep-align/BPUM_1132___rapH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01163-BPUM_1132___rapH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01163-BPUM_1132___rapH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01163
# 2: BPUM_1132___rapH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 376
# Identity:     203/376 (54.0%)
# Similarity:   272/376 (72.3%)
# Gaps:           4/376 ( 1.1%)
# Score: 1065.5
# 
#
#=======================================

BSNT_01163         1 MSQAIPSSRVGVKINEWYKMIRQFSVPDAEVLKAEVEQDIQKMEEDQDLL     50
                      .:.:.||.|||||||||||||||||||||:|||||||:|::||||||||
BPUM_1132___r      1 -MEKVLSSHVGVKINEWYKMIRQFSVPDAEILKAEVEQEIERMEEDQDLL     49

BSNT_01163        51 IYYSLMCFRHQLMLDYLEPGQPYGNRPTVTELLETIETPQKKLTGLLKYY    100
                     |||.||||||||||||::|.:.  ..|:|::|::.||....:|:|:|:||
BPUM_1132___r     50 IYYQLMCFRHQLMLDYIKPSEK--RSPSVSDLVDKIENSNHQLSGMLQYY     97

BSNT_01163       101 SLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDEIEKAEFHFKVAEAYY    150
                     :.||:||:||.:||||:||.||:.||::|..|.|:||:||||||||||||
BPUM_1132___r     98 NAFFKGMHEFSKKEYVQAIQYYKIAERQLALVVDDIEQAEFHFKVAEAYY    147

BSNT_01163       151 HMKQTHVSMHHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKAL    200
                     .|||||||||||::|||||:.|..|.:|.||||.|||||||||..|:|:|
BPUM_1132___r    148 IMKQTHVSMHHIIKALDIYKEHEQYRVRQIQSLIVIAGNYDDFMRYEKSL    197

BSNT_01163       201 PHLEKALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVS    250
                     .||:.|..:|:...:.|.:|.:||||.|:|||......|::|:::...:.
BPUM_1132___r    198 QHLKTAYSIAVGANDQRLVAKTLLNIGNTYDRQSRYTEAIKHYKEVLDII    247

BSNT_01163       251 REKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKEL    300
                     ..:..|:.|..||.|.|:|.|:.||.:|...:||||.:.:..:......|
BPUM_1132___r    248 SSEKSDIKPITLFSLCWSLYKSNQTDEADLLVEEGLIYSSKVNDSLSVLL    297

BSNT_01163       301 FLFLQAVYKETVDERKIHDLLSYFEKKNLHAYIEACARSAAAVFESSCHF    350
                     |..|:|:|.:| ||:.:.::...||:|.||.|:||.|:|....:|....|
BPUM_1132___r    298 FKALKAIYMDT-DEQALKEVFDIFEEKKLHVYVEAFAQSVGLFYEKKGDF    346

BSNT_01163       351 EQAAAFYRKVLKAQEDILKGECLYAY    376
                     |:||.:|||.||||.||.||||||.|
BPUM_1132___r    347 EKAAEYYRKALKAQNDIQKGECLYDY    372


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