Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01982 and BPUM_1120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:31
# Commandline: needle
# -asequence pep-align/BSNT_01982___yjcJ.1.24716.seq
# -bsequence pep-align/BPUM_1120___yjcJ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01982___yjcJ-BPUM_1120___yjcJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01982___yjcJ-BPUM_1120___yjcJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01982___yjcJ
# 2: BPUM_1120___yjcJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 392
# Identity: 315/392 (80.4%)
# Similarity: 355/392 (90.6%)
# Gaps: 2/392 ( 0.5%)
# Score: 1635.0
#
#
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BSNT_01982___ 1 MSKHNWTLETQLVHNPFKTDGGTGAVSVPIQHASTFHQSSFEEFGAYDYS 50
|:.|:||.|||||||.||||..|||||||||||||||||||::||.||||
BPUM_1120___y 1 MTTHDWTFETQLVHNAFKTDRSTGAVSVPIQHASTFHQSSFDDFGQYDYS 50
BSNT_01982___ 51 RSGTPTRTALEETIAALEGGTRGFAFSSGMAAISTAFLLLSQGDHVLVTE 100
|||||||.|||:|||||||||||.||:||||||||||||||:|||||||.
BPUM_1120___y 51 RSGTPTRQALEDTIAALEGGTRGLAFASGMAAISTAFLLLSKGDHVLVTR 100
BSNT_01982___ 101 DVYGGTFRMVTEVLTRFGIEHTFVDMTDRNEVARSIKPNTKVIYMETPSN 150
|||||||||:|:||:|||||||||||||.|||.:.|:.||||||||||||
BPUM_1120___y 101 DVYGGTFRMITQVLSRFGIEHTFVDMTDLNEVKKGIQSNTKVIYMETPSN 150
BSNT_01982___ 151 PTLGITDIKAIVQLAKENGCLTFLDNTFMTPALQRPLDLGVDIVLHSATK 200
||||||||:.:||||||:.|||||||||:|||||||||||||:|||||||
BPUM_1120___y 151 PTLGITDIEGVVQLAKEHDCLTFLDNTFLTPALQRPLDLGVDVVLHSATK 200
BSNT_01982___ 201 FLSGHSDVLSGLAAVKDEELGKQLYKLQNAFGAVLGVQDCWLVLRGLKTL 250
|||||||||||||.||||:||::||.|||:||||||||||||||||||||
BPUM_1120___y 201 FLSGHSDVLSGLAVVKDEKLGEELYSLQNSFGAVLGVQDCWLVLRGLKTL 250
BSNT_01982___ 251 QVRLEKASQTAQRLAEFFQKHPAVKRVYYPGLADHPGAETHKSQSTGAGA 300
|||||||||||..||.|.::|||||:||||||.:|.||:..:.|::||||
BPUM_1120___y 251 QVRLEKASQTAFELASFLKEHPAVKKVYYPGLDNHLGADIQRKQASGAGA 300
BSNT_01982___ 301 VLSFELESKEAVKKLVENVSLPVFAVSLGAVESILSYPATMSHAAMPKEE 350
|||||||::.|||:||:.|:|||||||||||||||||||.||||||||||
BPUM_1120___y 301 VLSFELENEAAVKELVDAVTLPVFAVSLGAVESILSYPAKMSHAAMPKEE 350
BSNT_01982___ 351 REKRGITDGLLRLSVGVEHADDLEHDFEQALKEIAPVAVR-- 390
||||||||||||||||||:.:||:.||:|||.::.||.|.
BPUM_1120___y 351 REKRGITDGLLRLSVGVENGEDLKRDFKQALDQLKPVLVNQS 392
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