Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01981 and BPUM_1119
See
DNA alignment /
Visit
BSNT_01981 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:31
# Commandline: needle
# -asequence pep-align/BSNT_01981___yjcI.1.24716.seq
# -bsequence pep-align/BPUM_1119___yjcI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01981___yjcI-BPUM_1119___yjcI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01981___yjcI-BPUM_1119___yjcI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01981___yjcI
# 2: BPUM_1119___yjcI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 385
# Identity: 316/385 (82.1%)
# Similarity: 342/385 (88.8%)
# Gaps: 17/385 ( 4.4%)
# Score: 1656.0
#
#
#=======================================
BSNT_01981___ 1 MKREGVSYMSQHVETKLAQIGNRSDEVTGTVSAPIYLSTAYRHRGIGEST 50
|::||||.||||||||:|.|||||.|:|||||||||||||||
BPUM_1119___y 1 --------MTEHVETTLAQIGNRSEEATGTVSPPVYLSTAYRHRGIGEST 42
BSNT_01981___ 51 GFDYVRTKNPTRQLVEDAIANLENGARGLAFSSGMAAIQTIMALFKSGDE 100
||||:|||||||||||||||:||.|..|.||||||||||||.|||:||||
BPUM_1119___y 43 GFDYIRTKNPTRQLVEDAIASLEEGTAGFAFSSGMAAIQTIKALFESGDE 92
BSNT_01981___ 101 LIVSSDLYGGTYRLFENEWKKYGLTFHYDDFSDEDCLRSKITPNTKAVFV 150
||||||||||||||||||||||||.|.||||||||||||||||||||||:
BPUM_1119___y 93 LIVSSDLYGGTYRLFENEWKKYGLRFLYDDFSDEDCLRSKITPNTKAVFI 142
BSNT_01981___ 151 ETPTNPLMQEADIEHIARITKEHGLLLIVDNTFYTPVLQRPLELGADIVI 200
|||||||||||||:.||:|.||||.|:||||||||||||:|:.|||||||
BPUM_1119___y 143 ETPTNPLMQEADIQKIAKIAKEHGALVIVDNTFYTPVLQKPITLGADIVI 192
BSNT_01981___ 201 HSATKYLGGHNDLLAGLVVVKDERLGEEMFQHQNAIGAVLPPFDSWLLMR 250
||||||||||||:||||||.|.|:|.|:||||||||||||.|||||||||
BPUM_1119___y 193 HSATKYLGGHNDVLAGLVVTKGEQLSEDMFQHQNAIGAVLSPFDSWLLMR 242
BSNT_01981___ 251 GMKTLSLRMRQHQANAQELAAFLEEQEEISDVLYPGKGGMLSFRLQKEEW 300
|||||:||||||:|||||||.||::|.||.||||||||||||||:.:|:|
BPUM_1119___y 243 GMKTLALRMRQHEANAQELAEFLKKQPEIQDVLYPGKGGMLSFRVAEEDW 292
BSNT_01981___ 301 VNPFLKALKTICFAESLGGVESFITYPATQTHMDIPEEIRIANGVCNRLL 350
||||||.||||||||||||:|||||||||||||||||||||||||||:||
BPUM_1119___y 293 VNPFLKQLKTICFAESLGGIESFITYPATQTHMDIPEEIRIANGVCNKLL 342
BSNT_01981___ 351 RFSVGIEHAEDLKEDLKQALCQVKEGAVSFE---- 381
||||||||.:|||.||||||.|||| |
BPUM_1119___y 343 RFSVGIEHVDDLKADLKQALSQVKE-----EVHAK 372
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.