Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01979 and BPUM_1118

See DNA alignment / Visit BSNT_01979 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:31
# Commandline: needle
#    -asequence pep-align/BSNT_01979___yjcH.1.24716.seq
#    -bsequence pep-align/BPUM_1118___yjcH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01979___yjcH-BPUM_1118___yjcH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01979___yjcH-BPUM_1118___yjcH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01979___yjcH
# 2: BPUM_1118___yjcH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity:     165/246 (67.1%)
# Similarity:   200/246 (81.3%)
# Gaps:           6/246 ( 2.4%)
# Score: 913.0
# 
#
#=======================================

BSNT_01979___      1 MAPKNGTVQEKKFFSKELNEEMTLLVYLPSNYSPLYKYHVIIAQDGHDYF     50
                     |..|.|.:||:...||||..:||||:|||.||||||.|||||||||||||
BPUM_1118___y      1 MVKKTGIIQEETLHSKELGADMTLLIYLPVNYSPLYTYHVIIAQDGHDYF     50

BSNT_01979___     51 RLGRIGRQVEELLSKREIDRSIIIGVPYKDVKERRNTYHPEGSKFSAYKR    100
                     |||:||||.|||:..:|::|||||||||::|.||||||||:|:||.||||
BPUM_1118___y     51 RLGKIGRQAEELMQNKEMERSIIIGVPYENVTERRNTYHPDGTKFEAYKR    100

BSNT_01979___    101 FIAHELVPFADDEYPTYQIGYGRTLIGDSLGATVSLMTALDYPNMFGNII    150
                     |:|:||||:.|..|||||||.|||.||||||||:|||||:|||::||.:|
BPUM_1118___y    101 FLANELVPYIDTHYPTYQIGSGRTFIGDSLGATISLMTAIDYPSLFGGLI    150

BSNT_01979___    151 MQSPYVDKHVLEAVKQSDDIKHLSIYHQIGTKETDVHTTDGNILDFTEPN    200
                     :||||||:.||||||||..:.|.:|.||||.:||.|.||||.:|||.:||
BPUM_1118___y    151 LQSPYVDESVLEAVKQSTALSHYAIIHQIGLEETAVKTTDGQVLDFIQPN    200

BSNT_01979___    201 RELKQLLEKKLSDYDFEPFDGDHKWTYWQPLITPALKKML------    240
                     .:||.|||:..:||.||.|:||||||:|||||.|:||:||      
BPUM_1118___y    201 DDLKALLEQSGADYLFETFEGDHKWTFWQPLIAPSLKRMLPYSLIN    246


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