Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01969 and BPUM_1109

See DNA alignment / Visit BSNT_01969 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:30
# Commandline: needle
#    -asequence pep-align/BSNT_01969___yjcA.1.24716.seq
#    -bsequence pep-align/BPUM_1109___yjcA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01969___yjcA-BPUM_1109___yjcA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01969___yjcA-BPUM_1109___yjcA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01969___yjcA
# 2: BPUM_1109___yjcA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 118
# Identity:      67/118 (56.8%)
# Similarity:    85/118 (72.0%)
# Gaps:           6/118 ( 5.1%)
# Score: 359.0
# 
#
#=======================================

BSNT_01969___      1 MVINGLTIVLLSLAVFRLARLLVFDTIMAPLRSLFHEEKEEKDADGNIET     50
                          ::.:|.:||.|||.||:|||||.||.|.|||||:||.:..|.:||
BPUM_1109___y      1 -----MSFLLFALASFRLTRLVVFDTITAPFRRLFHEEQEEVNEQGEVET     45

BSNT_01969___     51 YIVIKGTGVRAFIGELLSCYWCTGVWCAGFLILCQALIPQAAQWLILLLA    100
                     ||:|||.|:|::||||||||||||:||...|:|...|.|..:.||.||||
BPUM_1109___y     46 YIIIKGKGLRSWIGELLSCYWCTGMWCTAALLLIYILFPVISMWLNLLLA     95

BSNT_01969___    101 IAGLAGIIETLVSKWLQE    118
                     ||..|||||.:|||.:: 
BPUM_1109___y     96 IAAAAGIIEAIVSKLVK-    112


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