Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01966 and BPUM_1107

See DNA alignment / Visit BSNT_01966 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:30
# Commandline: needle
#    -asequence pep-align/BSNT_01966.1.24716.seq
#    -bsequence pep-align/BPUM_1107___cotW.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01966-BPUM_1107___cotW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01966-BPUM_1107___cotW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01966
# 2: BPUM_1107___cotW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 132
# Identity:      49/132 (37.1%)
# Similarity:    81/132 (61.4%)
# Gaps:          31/132 (23.5%)
# Score: 242.5
# 
#
#=======================================

BSNT_01966         1 ----------------MSEEKDALQKNKEELEANIDPLTKLLVSDVLNKN     34
                                     ::||.   :|.:.::...:||||.|||||:||||
BPUM_1107___c      1 MTLSFSNIMYERGEIIVAEEN---EKKEFQINTEVDPLTSLLVSDILNKN     47

BSNT_01966        35 NVTEDKKRNLSEAQKQAIITMVNDLQKQANEFVERVNKKKADAEKAE--Q     82
                     |:|:|:|.|:|:.|::.|:.:|.||||:|::||::..:||..||.|:  :
BPUM_1107___c     48 NITDDQKANISDDQRRMILKLVEDLQKKADDFVQQQQEKKRQAEAAKHVE     97

BSNT_01966        83 EAAPQ---KRRRTTLRDRVRQRK-----NDNI    106
                     |.||:   :.:|.:||||::||:     ||  
BPUM_1107___c     98 EVAPEPQVRPKRNSLRDRIQQRRDAQRNND--    127


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