Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01964 and BPUM_1106

See DNA alignment / Visit BSNT_01964 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:30
# Commandline: needle
#    -asequence pep-align/BSNT_01964___cotX.1.24716.seq
#    -bsequence pep-align/BPUM_1106___cotX.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01964___cotX-BPUM_1106___cotX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01964___cotX-BPUM_1106___cotX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01964___cotX
# 2: BPUM_1106___cotX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 163
# Identity:     109/163 (66.9%)
# Similarity:   135/163 (82.8%)
# Gaps:           7/163 ( 4.3%)
# Score: 546.0
# 
#
#=======================================

BSNT_01964___      1 MESRPYSWVALDNSCTHPGS-GYKREAVCHDVCSGG--EDANAFQDFDQL     47
                     |:|:||||||||.:|||.|. .|:|:|    ||.|.  :|.:..|||||:
BPUM_1106___c      1 MDSKPYSWVALDRNCTHHGDYNYERKA----VCDGNYYDDEDVLQDFDQV     46

BSNT_01964___     48 SLNKQTSEEMIIVRDSCDIDVTSTDTQVAASIQAALQTAVITIVNLSIAD     97
                     |:.||||||:|||||||||:|:|.|.|||||||.|:|||:|||.|:||||
BPUM_1106___c     47 SVTKQTSEEVIIVRDSCDINVSSVDAQVAASIQVAVQTAIITITNISIAD     96

BSNT_01964___     98 GDLADQVIQDLVQQSVNKQSNRQKLVIENSRNVNVTTTDTDIALSIQTLT    147
                     |||||:|.|||:|.:.:||:|||||||||||||.|:|.|.||:::|||||
BPUM_1106___c     97 GDLADRVTQDLLQAATHKQTNRQKLVIENSRNVTVSTIDADISIAIQTLT    146

BSNT_01964___    148 QTLAATIIAVGIL    160
                     |||.|||:|:|||
BPUM_1106___c    147 QTLVATIVAIGIL    159


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