Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01963 and BPUM_1105

See DNA alignment / Visit BSNT_01963 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:30
# Commandline: needle
#    -asequence pep-align/BSNT_01963___cotY.1.24716.seq
#    -bsequence pep-align/BPUM_1105___cotY.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01963___cotY-BPUM_1105___cotY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01963___cotY-BPUM_1105___cotY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01963___cotY
# 2: BPUM_1105___cotY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 163
# Identity:     141/163 (86.5%)
# Similarity:   152/163 (93.3%)
# Gaps:           1/163 ( 0.6%)
# Score: 795.0
# 
#
#=======================================

BSNT_01963___      1 MSCGKTHGRH-ENCVCDAVEKILAEQEAVEEQCPTGCYTNLLNPTIAGKD     49
                     |||||.|||| ||||||||:||||||||||::|||.||:|||:||::|||
BPUM_1105___c      1 MSCGKHHGRHDENCVCDAVDKILAEQEAVEDKCPTSCYSNLLSPTVSGKD     50

BSNT_01963___     50 TIPFLLFDKKGGLFSTFGNVGGFVDDMQCFESIFFRVEKLCDCCATLSIL     99
                     |||||||||||||||||||:||||||.|||||||||||||.|||||||:|
BPUM_1105___c     51 TIPFLLFDKKGGLFSTFGNIGGFVDDCQCFESIFFRVEKLNDCCATLSVL    100

BSNT_01963___    100 RPVDVKGDTLSVCHPCDPDFFGLEKTDFCIEVDLGCFCAIQCLSPELVDR    149
                     |||||.|.||||||||||||||||||||||||||.||||||||:||||||
BPUM_1105___c    101 RPVDVHGHTLSVCHPCDPDFFGLEKTDFCIEVDLNCFCAIQCLNPELVDR    150

BSNT_01963___    150 TSPHKDKKHHHNG    162
                     ..|.|||||||:|
BPUM_1105___c    151 VMPTKDKKHHHHG    163


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