Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01959 and BPUM_1102
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:30
# Commandline: needle
# -asequence pep-align/BSNT_01959___yjbX.1.24716.seq
# -bsequence pep-align/BPUM_1102___yjbX.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01959___yjbX-BPUM_1102___yjbX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01959___yjbX-BPUM_1102___yjbX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01959___yjbX
# 2: BPUM_1102___yjbX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 226
# Identity: 106/226 (46.9%)
# Similarity: 147/226 (65.0%)
# Gaps: 23/226 (10.2%)
# Score: 491.0
#
#
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BSNT_01959___ 1 MSNKKRNADKKPLMYIVQPDYAETTRSSMQEIVIKR-KADKPAPPKAEEK 49
||| |.:.::|||||||||.|.| :..:||.||.|| |::||......:|
BPUM_1102___y 1 MSN-KGDENQKPLMYIVQPSYDE-SMPAMQNIVRKRKKSEKPQEMSKSKK 48
BSNT_01959___ 50 PAYHEKEQEEAVAQDVLQEDQKPAAEPVSQQIQEVREPENIKSQEEQKQE 99
....|...|:.|||:: |.:|.|..|..||:|::.:..:...:|:..:|
BPUM_1102___y 49 DKMEESTHEDPVAQEI--EKKKEAEPPARQQVQDMIQETDHTQEEDITKE 96
BSNT_01959___ 100 PQAVEETVEHEPPKAEKKEEPALEARKPEKEPEAVHSADKAEEKAPPARK 149
|:.::| :|.| |:.||.||.|....|.| |..::
BPUM_1102___y 97 PELIQE---------QKPE------REEEKPPEGVFHETKEE---PRRKR 128
BSNT_01959___ 150 VKKPMSKMTIHEKIDFLTKLPHNMPRALCLIEANGRTYRGVIVGRRNDSV 199
||||:|:|:|.||:||||.||||||||||||||:|:||||:|:.|:.|:|
BPUM_1102___y 129 VKKPLSQMSIDEKVDFLTSLPHNMPRALCLIEADGKTYRGIIMDRKEDTV 178
BSNT_01959___ 200 LLRTTGNGAPTELAIDDITSLHPLGF 225
::||.|.|.|.|||||||:|:|||||
BPUM_1102___y 179 VIRTAGGGNPVELAIDDISSIHPLGF 204
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