Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01959 and BPUM_1102

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:30
# Commandline: needle
#    -asequence pep-align/BSNT_01959___yjbX.1.24716.seq
#    -bsequence pep-align/BPUM_1102___yjbX.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01959___yjbX-BPUM_1102___yjbX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01959___yjbX-BPUM_1102___yjbX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01959___yjbX
# 2: BPUM_1102___yjbX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 226
# Identity:     106/226 (46.9%)
# Similarity:   147/226 (65.0%)
# Gaps:          23/226 (10.2%)
# Score: 491.0
# 
#
#=======================================

BSNT_01959___      1 MSNKKRNADKKPLMYIVQPDYAETTRSSMQEIVIKR-KADKPAPPKAEEK     49
                     ||| |.:.::|||||||||.|.| :..:||.||.|| |::||......:|
BPUM_1102___y      1 MSN-KGDENQKPLMYIVQPSYDE-SMPAMQNIVRKRKKSEKPQEMSKSKK     48

BSNT_01959___     50 PAYHEKEQEEAVAQDVLQEDQKPAAEPVSQQIQEVREPENIKSQEEQKQE     99
                     ....|...|:.|||::  |.:|.|..|..||:|::.:..:...:|:..:|
BPUM_1102___y     49 DKMEESTHEDPVAQEI--EKKKEAEPPARQQVQDMIQETDHTQEEDITKE     96

BSNT_01959___    100 PQAVEETVEHEPPKAEKKEEPALEARKPEKEPEAVHSADKAEEKAPPARK    149
                     |:.::|         :|.|      |:.||.||.|....|.|   |..::
BPUM_1102___y     97 PELIQE---------QKPE------REEEKPPEGVFHETKEE---PRRKR    128

BSNT_01959___    150 VKKPMSKMTIHEKIDFLTKLPHNMPRALCLIEANGRTYRGVIVGRRNDSV    199
                     ||||:|:|:|.||:||||.||||||||||||||:|:||||:|:.|:.|:|
BPUM_1102___y    129 VKKPLSQMSIDEKVDFLTSLPHNMPRALCLIEADGKTYRGIIMDRKEDTV    178

BSNT_01959___    200 LLRTTGNGAPTELAIDDITSLHPLGF    225
                     ::||.|.|.|.|||||||:|:|||||
BPUM_1102___y    179 VIRTAGGGNPVELAIDDISSIHPLGF    204


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