Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01956 and BPUM_1100

See DNA alignment / Visit BSNT_01956 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:29
# Commandline: needle
#    -asequence pep-align/BSNT_01956___yjbV.1.24716.seq
#    -bsequence pep-align/BPUM_1100___thiDA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01956___yjbV-BPUM_1100___thiDA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01956___yjbV-BPUM_1100___thiDA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01956___yjbV
# 2: BPUM_1100___thiDA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity:     179/271 (66.1%)
# Similarity:   220/271 (81.2%)
# Gaps:           3/271 ( 1.1%)
# Score: 919.0
# 
#
#=======================================

BSNT_01956___      1 MSIYKALTIAGSDSGGGAGIQADIKTFQELDVFGMSAITAVTAQNTLGVH     50
                     |:|.||.||||||||||||||||:||||||.|||||||||:|||||||||
BPUM_1100___t      1 MTIKKAFTIAGSDSGGGAGIQADLKTFQELGVFGMSAITAITAQNTLGVH     50

BSNT_01956___     51 GVHPLTVEALRQQIDAVAEDLRPDAVKTGMLWNADMIEEVARKIDEYGFN    100
                     ||:||:.|||..|||||||||.||||||||||:||||:.||.|..:|.. 
BPUM_1100___t     51 GVYPLSNEALESQIDAVAEDLLPDAVKTGMLWSADMIKIVADKTVQYDM-     99

BSNT_01956___    101 RVIVDPVMIAKGGASLLRDESVATLKELLIPRSYAITPNVPEAETLTGMT    150
                     ::|||||||||||||||.:::|:.||..|:|.|||:|||:||||.||||.
BPUM_1100___t    100 KLIVDPVMIAKGGASLLNEDAVSALKTHLLPVSYAVTPNLPEAEVLTGMH    149

BSNT_01956___    151 ISSLDDRKKAAEQLVKMGAQHVIIKGGHQPEDNHITDLLFDGSMFMQITH    200
                     |.:.:||..|||:|.::|.:||:|||||.|....|||||:||..|:::|:
BPUM_1100___t    150 IQTKEDRYLAAERLYELGTKHVVIKGGHGPSGGKITDLLYDGKGFIEVTN    199

BSNT_01956___    201 PYINTKHTHGTGCTFAAALTAQTAKGDSIHQAFEVAANFVREAVENTLGI    250
                     .:|:|.|||||||||||||||:.|||.|:.:||:.|..||.||::..|.|
BPUM_1100___t    200 EHIDTPHTHGTGCTFAAALTAEIAKGYSMREAFDTAETFVHEAIKFPLNI    249

BSNT_01956___    251 GSGHGPTNHFAFKRNSLNTSR    271
                     |:|||||||||:::|.|..  
BPUM_1100___t    250 GAGHGPTNHFAYQQNRLKR--    268


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