Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01954 and BPUM_1099

See DNA alignment / Visit BSNT_01954 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:29
# Commandline: needle
#    -asequence pep-align/BSNT_01954___thiF.1.24716.seq
#    -bsequence pep-align/BPUM_1099___thiF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01954___thiF-BPUM_1099___thiF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01954___thiF-BPUM_1099___thiF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01954___thiF
# 2: BPUM_1099___thiF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 337
# Identity:     231/337 (68.5%)
# Similarity:   275/337 (81.6%)
# Gaps:           1/337 ( 0.3%)
# Score: 1220.0
# 
#
#=======================================

BSNT_01954___      1 MTGRYSRQELFAPIGPSGQKKLKEARAVIIGAGALGTASAEMLVRAGVGH     50
                     |:.||||||||.|||..|||:|.:::|||||||||||||||||||||||.
BPUM_1099___t      1 MSTRYSRQELFQPIGTEGQKRLNDSKAVIIGAGALGTASAEMLVRAGVGS     50

BSNT_01954___     51 VKIADRDYVEWSNLQRQQLYTEDDVKKEMPKAAAAERHLRSINSDVDVTG    100
                     |.|.||||:|||||||||||.|.||:..:|||.|||:.|:.|||||.|.|
BPUM_1099___t     51 VTILDRDYIEWSNLQRQQLYIEQDVQDRLPKAIAAEKRLKQINSDVQVKG    100

BSNT_01954___    101 LVMDVTAENIFELIRDASIIVDAADNFETRLIVNDAAVKEGIPFLYGACV    150
                     :|:|||||.|.||:..||||||||||||.|:|.||||||..|||||||||
BPUM_1099___t    101 IVVDVTAEQIDELVSGASIIVDAADNFEVRMIANDAAVKHQIPFLYGACV    150

BSNT_01954___    151 GSYGLTFTVVPGSTPCLHCLLDTLPIGGATCDTAGIISPAVLQVAVFQVT    200
                     .|||:.|||:||.||||||||:.||..|.||||||||||.|.|||.:||.
BPUM_1099___t    151 ASYGIQFTVIPGQTPCLHCLLEHLPAQGMTCDTAGIISPVVQQVASYQVA    200

BSNT_01954___    201 DALKLLTGEECEPMLRSFDLWKNERSEVR-AASLKHDACPSCGTKDFPFL    249
                     ||||.|||.:..|:|||||||.||||::| |:|||...|||||.|.:|||
BPUM_1099___t    201 DALKYLTGHQVTPILRSFDLWSNERSDIRSASSLKKKQCPSCGMKTYPFL    250

BSNT_01954___    250 SYENQTKAAVLCGRNTVQIRSSITKEADLEALAAQLRQAGLEVAANPYLI    299
                     ||:.:.||.||||||||||||:......|:.:|.:|::||::|..||||:
BPUM_1099___t    251 SYDKRAKADVLCGRNTVQIRSAAETPPSLKEVAFRLKKAGMDVLENPYLL    300

BSNT_01954___    300 SCRSDDMKMVLFRDGRALIHGTNDIARAKSIYHKWIG    336
                     ||:.|:.|:|||:|||||:|||||||:|::|||:|||
BPUM_1099___t    301 SCQKDEYKLVLFKDGRALVHGTNDIAKARTIYHQWIG    337


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