Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01952 and BPUM_1098

See DNA alignment / Visit BSNT_01952 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:29
# Commandline: needle
#    -asequence pep-align/BSNT_01952___thiG.1.24716.seq
#    -bsequence pep-align/BPUM_1098___thiG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01952___thiG-BPUM_1098___thiG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01952___thiG-BPUM_1098___thiG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01952___thiG
# 2: BPUM_1098___thiG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     229/255 (89.8%)
# Similarity:   243/255 (95.3%)
# Gaps:           1/255 ( 0.4%)
# Score: 1157.0
# 
#
#=======================================

BSNT_01952___      1 MLTIGGKPFQSRLLLGTGKYPSFDIQKEAVAVSESDILTFAVRRMNIFDA     50
                     ||.||||.|.|||||||||||||::|||||.|||::||||||||||||:|
BPUM_1098___t      1 MLHIGGKTFTSRLLLGTGKYPSFEVQKEAVNVSEAEILTFAVRRMNIFEA     50

BSNT_01952___     51 SQPNFLEQLDLSKYTLLPNTAGASTAEEAVRIARLAKASGLCDMIKVEVI    100
                     ||||||||||||||||||||||||||:|||||||||||||||||||||||
BPUM_1098___t     51 SQPNFLEQLDLSKYTLLPNTAGASTADEAVRIARLAKASGLCDMIKVEVI    100

BSNT_01952___    101 GCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAIM    150
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BPUM_1098___t    101 GCSRSLLPDPVETLKASEMLLEEGFIVLPYTSDDVVLARKLEELGVHAIM    150

BSNT_01952___    151 PGASPIGSGQGILNPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGAD    200
                     |||||||||||:||||||||||||||||||:|||:|||||||||||||||
BPUM_1098___t    151 PGASPIGSGQGLLNPLNLSFIIEQAKVPVIIDAGVGSPKDAAYAMELGAD    200

BSNT_01952___    201 GVLLNTAVSGADDPVKMARAMKLAVEAGRLSYEAGRIPLKQYGTASSPVE    250
                     .||||||||||.||||||:|||||:|:|||.:||||||||.|||||||.|
BPUM_1098___t    201 AVLLNTAVSGAKDPVKMAKAMKLAIESGRLGFEAGRIPLKNYGTASSPQE    250

BSNT_01952___    251 GLPV-    254
                     |:|. 
BPUM_1098___t    251 GMPAF    255


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