Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01950 and BPUM_1096

See DNA alignment / Visit BSNT_01950 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:29
# Commandline: needle
#    -asequence pep-align/BSNT_01950___goxB.1.24716.seq
#    -bsequence pep-align/BPUM_1096___goxB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01950___goxB-BPUM_1096___goxB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01950___goxB-BPUM_1096___goxB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01950___goxB
# 2: BPUM_1096___goxB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 370
# Identity:     206/370 (55.7%)
# Similarity:   264/370 (71.4%)
# Gaps:           1/370 ( 0.3%)
# Score: 1068.0
# 
#
#=======================================

BSNT_01950___      1 MKRHYEAVVIGGGMIGSAIAYYLAKENKSTALFESGTMGGRTTSAAAGML     50
                     ||:||:..:||||:||.:|||:|||..|...|||:..:|.:|||||||||
BPUM_1096___g      1 MKKHYDVAIIGGGIIGMSIAYHLAKAGKQVVLFEASEVGKQTTSAAAGML     50

BSNT_01950___     51 GAHAECE-ERDAFFDFAMHSQRLYKGLGEELYALSGVDIRQHNGGMFKLA     99
                     |||||.| ..|.||.....||.||:.|..:|...||:|||...||:.|:|
BPUM_1096___g     51 GAHAEGEGYEDTFFQVGRASQSLYEKLKVDLRHESGIDIRTSAGGIMKVA    100

BSNT_01950___    100 FSEEDVLQLRQMDDLDSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVE    149
                     |:||:...|.:|..|.:..|.....|.:..|..:.:|.||..|::|||||
BPUM_1096___g    101 FTEEEKQALCRMQHLSTFEWIDAGSVKKCMPQMAENILGAGLIKEDVHVE    150

BSNT_01950___    150 PYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALSIKTPSGDVWANHVV    199
                     ||.||:|:.|||.|.|||:.|.|||:.|:|:.|||:|:|..|....:.:.
BPUM_1096___g    151 PYAVCRAFWKAAVMYGAEVKECTPVIEVKREKEALAIRTTVGTFTCDDLT    200

BSNT_01950___    200 VASGVWSGMFFKQLGLNNAFLPVKGECLSVWNDDIPLTKTLYHDHCYIVP    249
                     ||||||||.||::|||:::..||||||:||||....|..|:||||||||.
BPUM_1096___g    201 VASGVWSGRFFEELGLSHSLYPVKGECVSVWNQGPALEHTIYHDHCYIVQ    250

BSNT_01950___    250 RKSGKLVVGATMKLGDWSETPDLGGLESVMKKAKTMLPAIQNMKVDRFWA    299
                     |.|||||||||||..:|...|.|||:|:|::||..::|:|:.|.:|:.||
BPUM_1096___g    251 RDSGKLVVGATMKPNEWQTVPTLGGIEAVIQKASQLMPSIKEMPIDQCWA    300

BSNT_01950___    300 GLRPGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMNK    349
                     ||||.|.|..|||||||||.||||||||:||||||||.||.:|.|||:.|
BPUM_1096___g    301 GLRPATNDRHPYIGRHPEDQRILFAAGHYRNGILLAPITGEIIRDLIIGK    350

BSNT_01950___    350 EVNQDWLHAFRIDRKEAVQI    369
                     .|.::|||||||.||||:.:
BPUM_1096___g    351 PVKKEWLHAFRIGRKEALFV    370


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