Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01944 and BPUM_1092

See DNA alignment / Visit BSNT_01944 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:28
# Commandline: needle
#    -asequence pep-align/BSNT_01944___prpE.1.24716.seq
#    -bsequence pep-align/BPUM_1092___yjbP.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01944___prpE-BPUM_1092___yjbP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01944___prpE-BPUM_1092___yjbP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01944___prpE
# 2: BPUM_1092___yjbP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity:     148/247 (59.9%)
# Similarity:   198/247 (80.2%)
# Gaps:           3/247 ( 1.2%)
# Score: 858.0
# 
#
#=======================================

BSNT_01944___      1 MAYDIISDIHGCYDEMTALIQKLGYTIKNGVPVHEEGRVLVFAGDLTDRG     50
                     |.:|||.||||||:|:..||.||||.:|:|:|||.:.|.|...|||||||
BPUM_1092___y      1 MKFDIIGDIHGCYEELLTLIHKLGYELKHGLPVHPDKRTLALVGDLTDRG     50

BSNT_01944___     51 PKSIEVIRFVAGAYEKGAVRYVPGNHCNKLYRYLKGNPVKVMHGLETTAA    100
                     |:|::|:|||..||..||:||||||||.||||||||||||::||:|||..
BPUM_1092___y     51 PQSVDVMRFVIHAYSHGAIRYVPGNHCFKLYRYLKGNPVKLLHGIETTVN    100

BSNT_01944___    101 ELEELSKDEKKSVSEQFMKLYETAPLYDILHNGELVVAHAGIRADDIG-K    149
                     |:::|...|:.::|.:|.:|:|.|||||:|...|||:|||.::..||| |
BPUM_1092___y    101 EIKQLPLHEQTTLSHEFKQLFEKAPLYDVLIPNELVIAHAAMKEKDIGRK    150

BSNT_01944___    150 YTRRVKDFVLYGDVTGETYPDGRPVRRDWAAAYNGKAWVVYGHTPVKEPR    199
                     ..::::.::|:|.|||||:|||||||:|||..|.||.|:||||||||:||
BPUM_1092___y    151 PNKQMRSYLLFGAVTGETWPDGRPVRKDWAKEYRGKPWIVYGHTPVKDPR    200

BSNT_01944___    200 KVNRTINIDTGCVFGNQLTGFRFPEIETVSVPSSLPYDESRFRPI--    244
                     .|.||:|||||||||::|:..::||:||:|||||:|||:|||:..  
BPUM_1092___y    201 FVGRTVNIDTGCVFGHRLSALKYPELETISVPSSMPYDDSRFQHFTS    247


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