Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01944 and BPUM_1092
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:29
# Commandline: needle
# -asequence dna-align/BSNT_01944___prpE.1.24716.seq
# -bsequence dna-align/BPUM_1092___yjbP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01944___prpE-BPUM_1092___yjbP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01944___prpE-BPUM_1092___yjbP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01944___prpE
# 2: BPUM_1092___yjbP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 821
# Identity: 500/821 (60.9%)
# Similarity: 500/821 (60.9%)
# Gaps: 163/821 (19.9%)
# Score: 1359.0
#
#
#=======================================
BSNT_01944___ 1 ATGGCTTACGATATCATCAGCGATATTCATGGCTGCTATGATGAAATGAC 50
|||...|..||||||||..|.|||||.||.||||||||.||.|| .|
BPUM_1092___y 1 ATGAAATTTGATATCATTGGTGATATCCACGGCTGCTACGAAGA----GC 46
BSNT_01944___ 51 TGCATTA-----ATCCAAAAGCTTGGCTATAC--AATCAAAAATGGAGTA 93
||| ||| ||.||.||.||.|| |||| |.|||||.|||||.||
BPUM_1092___y 47 TGC-TTACCCTCATACACAAACTAGG--ATACGAACTCAAACATGGATTA 93
BSNT_01944___ 94 CCTGTCCA---TGA----AGAAGGC-AGGGTGCTTGTTTTTGCCGGAGAT 135
||.||||| ||| ||||.|| | |..||||| |||.|||
BPUM_1092___y 94 CCCGTCCATCCTGATAAGAGAACGCTA--GCACTTGT------CGGTGAT 135
BSNT_01944___ 136 TTAACTGACAGAGGGCCCAAATCGATAGAGGTCATCCGATTTGTAGCCGG 185
|||||.||..||||.||..|.||..||||.|||||.||.|||||
BPUM_1092___y 136 TTAACAGATCGAGGTCCTCAGTCAGTAGATGTCATGCGCTTTGT------ 179
BSNT_01944___ 186 C------GCTTACGAAAAAGGCGCTGTGCGTTATGTCCCGGGAAACCATT 229
| ||.|||..|.|.|||||..|.||.||.||.||.||.||.||||
BPUM_1092___y 180 CATTCATGCCTACTCACATGGCGCGATCCGCTACGTACCTGGCAATCATT 229
BSNT_01944___ 230 GCAATAAATTATATCGTTACTTAAAAGGAAATCCGGTAAAAGTGATGCAT 279
||..|||..|.|||||.||.||.|||||||||||.||.|||.|..|.|||
BPUM_1092___y 230 GCTTTAAGCTTTATCGCTATTTGAAAGGAAATCCTGTGAAATTACTTCAT 279
BSNT_01944___ 280 GGTCTCGAAAC-----------------AACAGCGGCAGAGCTTGAGGAA 312
||..||||||| ||||.|.|| .||||.|.|||
BPUM_1092___y 280 GGCATCGAAACCACCGTAAATGAAATAAAACAACTGC--CGCTTCATGAA 327
BSNT_01944___ 313 CTTTCCAAA-GATGAGAAAAAATCA--GTCAGC--GAACAGTTTATGAAG 357
|||| || || |||| | ||| ||||.|.||
BPUM_1092___y 328 -----CAAACGA-----------CATTGTCA-CATGAA---TTTAAGCAG 357
BSNT_01944___ 358 CTGTACGAAACAGCGCCGCTTTACGACAT-CTTA--CATAATGGAGAATT 404
||.|..||.|..||.|||||||||||..| |||| |.|||| |||.|
BPUM_1092___y 358 CTATTTGAGAAGGCTCCGCTTTACGATGTACTTATTCCTAAT---GAACT 404
BSNT_01944___ 405 AGTTGTCGCCCATGCTGGCAT-----AAGAGCTGACGATATCGGCA-AAT 448
.||..|.||.||.||.|..|| ||.|| ||.||.||.| ||
BPUM_1092___y 405 GGTGATTGCTCACGCAGCGATGAAGGAAAAG-----GACATTGGTAGAA- 448
BSNT_01944___ 449 ATACCCG------CAGA-GTGA----AGGACTTTGTGCTTTACGGTGACG 487
|.||| |||| |.|| | |||.|..||| ||.|..|
BPUM_1092___y 449 --AGCCGAACAAACAGATGCGATCCTA----TTTATTATTT--GGCGCAG 490
BSNT_01944___ 488 TGACGGGTGAAACATATCCGGACGGCAGACCCGT-CAGACGTGATTGGGC 536
|.||.||.|||||.|..|||||.||..||||.|| |.||.| ||||||||
BPUM_1092___y 491 TCACAGGAGAAACGTGGCCGGATGGACGACCGGTGCGGAAG-GATTGGGC 539
BSNT_01944___ 537 ---GGCAGCCTATAACGGAAAGGCTTGGGTGGTATACGGTCATACACCTG 583
||.| |||..||||||..|.|||.|.||.|||||.||||||||.|
BPUM_1092___y 540 AAAGGAA---TATCGCGGAAAACCATGGATTGTCTACGGACATACACCCG 586
BSNT_01944___ 584 TGAAAGAACCTCGAAAGGT---CAATCGCACCATCAACATTGATACAGGC 630
|||||||.||.|||...|| || |.|||.|||||||||||||||||
BPUM_1092___y 587 TGAAAGACCCGCGATTCGTTGGCA---GAACCGTCAACATTGATACAGGC 633
BSNT_01944___ 631 TGCGTGTTCGGAAATCAACTGACAGGCTTTCGCTTTCCAGAAATA----- 675
|||||.||.|| |.||.|| ||..||..||..|||||
BPUM_1092___y 634 TGCGTATTTGG----CCACCGA------TTATCTGCCCTCAAATATCCTG 673
BSNT_01944___ 676 -----GAAACCGTCTCTGTTCCAAGCTCCTTGCCTTACGACGAATCAAGA 720
|||||..|.||||||||...|||..|||||||.|||||.|||||.
BPUM_1092___y 674 AGCTTGAAACGATTTCTGTTCCTTCCTCTATGCCTTATGACGATTCAAGG 723
BSNT_01944___ 721 TTTC-GC----CCCAT-ATAA 735
|||| || |.||| ||||
BPUM_1092___y 724 TTTCAGCATTTCACATCATAA 744
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