Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01943 and BPUM_1091

See DNA alignment / Visit BSNT_01943 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:28
# Commandline: needle
#    -asequence pep-align/BSNT_01943___yjbO.1.24716.seq
#    -bsequence pep-align/BPUM_1091___rluA2.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01943___yjbO-BPUM_1091___rluA2.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01943___yjbO-BPUM_1091___rluA2.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01943___yjbO
# 2: BPUM_1091___rluA2
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 301
# Identity:     186/301 (61.8%)
# Similarity:   222/301 (73.8%)
# Gaps:          15/301 ( 5.0%)
# Score: 956.5
# 
#
#=======================================

BSNT_01943___      1 MEHFFIRKNITSAEDGMTVKEYAGELGISKRLLTDIKFGGGDLQINGEHV     50
                              :|:.|:|:.:|:|..:||||||:||||||.||||.||||||
BPUM_1091___r      1 ---------MTAKEEGLLLKDYLIDLGISKRMLTDIKFDGGDLLINGEHV     41

BSNT_01943___     51 TVKYVLKEGDLLIVKFPEEQVSETLLAEPIPLDILYEDEHVLVINKQPYV    100
                     ||:|.|..||.|.:.||:|:|||.|...|||||||:|||||||:||:||:
BPUM_1091___r     42 TVRYKLHNGDRLTILFPKEKVSEGLKPAPIPLDILFEDEHVLVLNKRPYI     91

BSNT_01943___    101 SSIPSREHPSGSIANGIIDHYQKNGVRATVHLVTRLDRDTSGVMLVAKHR    150
                     .||||||||..|||||::.||.:..||.|||||.||||||||||||||||
BPUM_1091___r     92 PSIPSREHPEHSIANGLLHHYAEQSVRLTVHLVNRLDRDTSGVMLVAKHR    141

BSNT_01943___    151 FAHSILSSAQKNGLVKRRYAAVVHGRMAQMEGTVDAPIGRHPDSIIERTV    200
                     ||||:||.|||:|.|||.|.|..||.:.:..||:.|.|.|..||||||.|
BPUM_1091___r    142 FAHSLLSKAQKSGAVKRTYRAFTHGMIKEKHGTIRAKIARKGDSIIERMV    191

BSNT_01943___    201 TPDGQKAVTHFYVTCANDD--MTSVALQLETGRTHQIRVHMSYLGHPLCG    248
                     ...||:|||||.|...:.:  |:.|||.|||||||||||||.|||:||.|
BPUM_1091___r    192 DDTGQEAVTHFTVRAVDTELNMSDVALALETGRTHQIRVHMQYLGYPLIG    241

BSNT_01943___    249 DTLYGGTRQEIGRQALHSEHLSFIHPLTQKNMTFHAPLPQDMRKLIKGEN    298
                     |||||||.:.:.|||||||.|.|.||:|.:.|||.||||:||:.|:.   
BPUM_1091___r    242 DTLYGGTNERMNRQALHSETLVFPHPMTGEEMTFSAPLPEDMKSLLL---    288

BSNT_01943___    299 H    299
                      
BPUM_1091___r    288 -    288


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