Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01942 and BPUM_1090

See DNA alignment / Visit BSNT_01942 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:28
# Commandline: needle
#    -asequence pep-align/BSNT_01942___ppnK.1.24716.seq
#    -bsequence pep-align/BPUM_1090___ppnK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01942___ppnK-BPUM_1090___ppnK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01942___ppnK-BPUM_1090___ppnK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01942___ppnK
# 2: BPUM_1090___ppnK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 266
# Identity:     231/266 (86.8%)
# Similarity:   253/266 (95.1%)
# Gaps:           0/266 ( 0.0%)
# Score: 1235.0
# 
#
#=======================================

BSNT_01942___      1 MKFAVSSKGDQVSDTLKSKIQAYLLDFDMELDENEPEIVISVGGDGTLLY     50
                     |||||||||:.:|||||:|||.|||||.|||:|.||::||:|||||||||
BPUM_1090___p      1 MKFAVSSKGNSISDTLKNKIQTYLLDFGMELNEEEPDLVITVGGDGTLLY     50

BSNT_01942___     51 AFHRYSDRLDKTAFVGVHTGHLGFYADWVPHEIEKLVLAIAKTPYHTVEY    100
                     |||||||||::|||||||||||||||||||.|||||||||||||||.|||
BPUM_1090___p     51 AFHRYSDRLNETAFVGVHTGHLGFYADWVPSEIEKLVLAIAKTPYHIVEY    100

BSNT_01942___    101 PLLEVIVTYHENEREERYLALNECTIKSIEGSLVADVEIKGQLFETFRGD    150
                     |:|||||.|::..|||:|||:|||||||:||:|||||||:||||||||||
BPUM_1090___p    101 PILEVIVRYNDGGREEKYLAMNECTIKSMEGTLVADVEIRGQLFETFRGD    150

BSNT_01942___    151 GLCLSTPSGSTAYNKALGGAIIHPSIRAIQLAEMASINNRVFRTVGSPLL    200
                     |||||||||||||||||||||||||||||||||||||||||||||||||:
BPUM_1090___p    151 GLCLSTPSGSTAYNKALGGAIIHPSIRAIQLAEMASINNRVFRTVGSPLI    200

BSNT_01942___    201 LPSHHDCMIKPRNEVDFQVTIDHLTLLHKDVKSIRCQVASEKVRFARFRP    250
                     ||.||.|:|||||:||||||||||||||||||||:|:||.|.||||||||
BPUM_1090___p    201 LPDHHTCVIKPRNDVDFQVTIDHLTLLHKDVKSIQCRVADENVRFARFRP    250

BSNT_01942___    251 FPFWKRVQDSFIGKGE    266
                     ||||||||||||||||
BPUM_1090___p    251 FPFWKRVQDSFIGKGE    266


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