Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01941 and BPUM_1089
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:28
# Commandline: needle
# -asequence pep-align/BSNT_01941___yjbM.1.24716.seq
# -bsequence pep-align/BPUM_1089___yjbM.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01941___yjbM-BPUM_1089___yjbM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01941___yjbM-BPUM_1089___yjbM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01941___yjbM
# 2: BPUM_1089___yjbM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 212
# Identity: 180/212 (84.9%)
# Similarity: 197/212 (92.9%)
# Gaps: 3/212 ( 1.4%)
# Score: 946.0
#
#
#=======================================
BSNT_01941___ 1 MMDDKQWERFLVPYRQAVEELKVKLKGIRTLYEYEDDHSPIEFVTGRVKP 50
||.|||::||.||:||||||||||||||.|||:||||||:|||||||||
BPUM_1089___y 1 -MDKKQWDQFLAPYKQAVEELKVKLKGIRKLYEFEDDHSPVEFVTGRVKP 49
BSNT_01941___ 51 VASILEKARRKSIPLHEIETMQDIAGLRIMCQFVDDIQIVKEMLFARKDF 100
||||||||:||.||:|||||||||||||||||||:|||:||:||.:||||
BPUM_1089___y 50 VASILEKAKRKDIPMHEIETMQDIAGLRIMCQFVEDIQVVKKMLQSRKDF 99
BSNT_01941___ 101 TVVDQRDYIAEHKESGYRSYHLVVLYPLQTVSGEKHVLVEIQIRTLAMNF 150
.|||:|||||||||||||||||||||||||::|||.:|||||||||||||
BPUM_1089___y 100 VVVDKRDYIAEHKESGYRSYHLVVLYPLQTINGEKQLLVEIQIRTLAMNF 149
BSNT_01941___ 151 WATIEHSLNYKYSGNIPEKVKLRLQRASEAASRLDEEMSEIRGEVQEAQA 200
||||||||||||||||||||||||||||||||.||:||||||||:||||.
BPUM_1089___y 150 WATIEHSLNYKYSGNIPEKVKLRLQRASEAASLLDDEMSEIRGEIQEAQV 199
BSNT_01941___ 201 AFSRKKKGSEQQ 212
|||||||...
BPUM_1089___y 200 AFSRKKKNDS-- 209
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