Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01941 and BPUM_1089

See Amino acid alignment / Visit BSNT_01941 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:28
# Commandline: needle
#    -asequence dna-align/BSNT_01941___yjbM.1.24716.seq
#    -bsequence dna-align/BPUM_1089___yjbM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01941___yjbM-BPUM_1089___yjbM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01941___yjbM-BPUM_1089___yjbM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01941___yjbM
# 2: BPUM_1089___yjbM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 651
# Identity:     476/651 (73.1%)
# Similarity:   476/651 (73.1%)
# Gaps:          33/651 ( 5.1%)
# Score: 1735.5
# 
#
#=======================================

BSNT_01941___      1 ATGATGGATGACAAACAATGGGAGCGTTTTTTAGTGCCGTACCGCCAGGC     50
                        |||||..|.|||||||||||.|..||..|.|..|||||....||.||
BPUM_1089___y      1 ---ATGGACAAAAAACAATGGGATCAATTCCTCGCACCGTATAAACAAGC     47

BSNT_01941___     51 TGTCGAAGAGTTGAAAGTGAAGCTCAAGGGGATCCGCACACTATATGAAT    100
                     .||||||||.||.||||||||.||.||.||.||.||.|..||.|||||||
BPUM_1089___y     48 AGTCGAAGAATTAAAAGTGAAACTAAAAGGCATTCGAAAGCTGTATGAAT     97

BSNT_01941___    101 ACGAGGACGACCATTCACCGATCGAATTTGTGACCGGACGCGTCAAGCCT    150
                     .||||||.|||||||||||..|.||||||||.||.||.||.||.||.||.
BPUM_1089___y     98 TCGAGGATGACCATTCACCAGTAGAATTTGTCACAGGCCGAGTGAAACCC    147

BSNT_01941___    151 GTGGCGAGCATTCTTGAAAAAGCGAGACGGAAAAGCATACCGCTGCATGA    200
                     ||.||.|||||..|.|||||.||.|..||.|||...||.||..|||||||
BPUM_1089___y    148 GTTGCCAGCATATTAGAAAAGGCAAAGCGTAAAGATATCCCAATGCATGA    197

BSNT_01941___    201 AATTGAAACCATGCAGGACATTGCTGGCCTTAGAATCATGTGCCAATTTG    250
                     |||||||||.||||||||.||||||||.|||.|.||.||||||||.||||
BPUM_1089___y    198 AATTGAAACGATGCAGGATATTGCTGGGCTTCGCATTATGTGCCAGTTTG    247

BSNT_01941___    251 TCGATGACATCCAAATCGTAAAAGAGATGCTTTTTGCCA-----GAAAAG    295
                     |.||.|||||.|||.||||.|||.|.|||||     |||     ||||||
BPUM_1089___y    248 TAGAAGACATACAAGTCGTGAAAAAAATGCT-----CCAGTCACGAAAAG    292

BSNT_01941___    296 ATTTCACCGTTGTGGATCAGAGGGATTATATTGCGGAACATAAAGAGAGC    345
                     |.|||...|||||.|||.|..|.||.||||||||.||.||||||||.|||
BPUM_1089___y    293 ACTTCGTGGTTGTTGATAAACGCGACTATATTGCAGAGCATAAAGAAAGC    342

BSNT_01941___    346 GGATACCGGTCATACCATCTTGTTGTGCTGTACCCTTTGCAGACGGTATC    395
                     ||||||||.||.|||||.|||||||||.|.||.||..||||.|||  |||
BPUM_1089___y    343 GGATACCGTTCGTACCACCTTGTTGTGTTATATCCGCTGCAAACG--ATC    390

BSNT_01941___    396 --CGGAGAAAAGCATGTTCTCGTAGAAATACAGATCCGTACACTGGCGAT    443
                       ||||||.|||||..|.||.||.|||||.||.||.||||||||.|||||
BPUM_1089___y    391 AACGGAGAGAAGCAGCTCCTTGTCGAAATCCAAATTCGTACACTTGCGAT    440

BSNT_01941___    444 GAATTTTTGGGCGACCATTGAACATTCATTGAATTATAAATACAGCGGAA    493
                     |||||||||||||||.|||||.||.||..|||||||||||||.|||||.|
BPUM_1089___y    441 GAATTTTTGGGCGACGATTGAGCACTCTCTGAATTATAAATATAGCGGGA    490

BSNT_01941___    494 ACATTCCTGAAAAAGTAAAACTAAGGCTTCAGCGCGCTTCTGAAGCGGCT    543
                     |.||.||.||.|||||.||.||..|.|||||..|.||||||||.||.||.
BPUM_1089___y    491 ATATCCCGGAGAAAGTCAAGCTGCGCCTTCAAAGAGCTTCTGAGGCAGCG    540

BSNT_01941___    544 TCCCGGCTTGATGAAGAGATGTCGGAGATCAGGGGTGAAGTACAGGAAGC    593
                     ||||..||||||||.||||||||.||.||.||.||.|||.|.||.|||||
BPUM_1089___y    541 TCCCTTCTTGATGATGAGATGTCTGAAATTAGAGGGGAAATTCAAGAAGC    590

BSNT_01941___    594 TCAAGCTGCCTTTTC----AAGAAAGAAAAAAGGAAGC-GAGCAACAATA    638
                     .||||..||.|||||    || |||||||||.|..||| ||         
BPUM_1089___y    591 ACAAGTAGCATTTTCCCGGAA-AAAGAAAAACGATAGCTGA---------    630

BSNT_01941___    639 G    639
                      
BPUM_1089___y    630 -    630


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