Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01940 and BPUM_1088

See DNA alignment / Visit BSNT_01940 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:28
# Commandline: needle
#    -asequence pep-align/BSNT_01940___yjbL.1.24716.seq
#    -bsequence pep-align/BPUM_1088___yjbL.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01940___yjbL-BPUM_1088___yjbL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01940___yjbL-BPUM_1088___yjbL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01940___yjbL
# 2: BPUM_1088___yjbL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 123
# Identity:      73/123 (59.3%)
# Similarity:    88/123 (71.5%)
# Gaps:           2/123 ( 1.6%)
# Score: 349.0
# 
#
#=======================================

BSNT_01940___      1 -MQNRIEILNATLSDDQLRLTCQTEGNEAERKPSGQMLVDSDHFAFVYIL     49
                      |||||||..|||.:|:|.||.::|....:.|.|||||||||||||||||
BPUM_1088___y      1 MMQNRIEIAEATLKEDRLILTTKSEEQIQKAKASGQMLVDSDHFAFVYIL     50

BSNT_01940___     50 ELADSFEYVIIKEHVWPELKQAHAQKIPVVLEAGDQTIELAGLHEELEYL     99
                     |..:||.|:|:.|..|..||:|....|||.|.|...::||..||:||.||
BPUM_1088___y     51 ENEESFSYLILGEDTWAPLKEAMTLDIPVYLAAEGHSLELIQLHQELHYL    100

BSNT_01940___    100 LENIKDNANYGEEMEEKVKHVFL    122
                     ::||||||||| :||||||..||
BPUM_1088___y    101 IDNIKDNANYG-DMEEKVKSTFL    122


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