Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01938 and BPUM_1087
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:28
# Commandline: needle
# -asequence pep-align/BSNT_01938___yjbK.1.24716.seq
# -bsequence pep-align/BPUM_1087___yjbK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01938___yjbK-BPUM_1087___yjbK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01938___yjbK-BPUM_1087___yjbK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01938___yjbK
# 2: BPUM_1087___yjbK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 192
# Identity: 109/192 (56.8%)
# Similarity: 138/192 (71.9%)
# Gaps: 2/192 ( 1.0%)
# Score: 552.0
#
#
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BSNT_01938___ 1 MSQEIEIEFKNMLTKQEFKNIAAALQLTEKDFTDQKNHYFDTDSFALKQK 50
|:||||||.|.:|.|:||:.:....||.:.||..|.|:||||..|.:|.:
BPUM_1087___y 1 MAQEIEIELKQLLMKEEFEQLKQHFQLKDSDFHTQTNYYFDTPQFDIKSQ 50
BSNT_01938___ 51 QAALRIRRKNGKYVLTLKEPADVGLLETHQQLSEVSDLAGFSVPEGPVKD 100
.||||:|.|||::|||||||.::|||||||.::..|:|..|.:|:|.|.|
BPUM_1087___y 51 FAALRMREKNGQWVLTLKEPHEIGLLETHQTIAPPSNLDDFQLPKGEVAD 100
BSNT_01938___ 101 QLHKLQIDTDAIQYFGSLATNRAEKETEKGLIVLDHSRYLNKEDYEIEFE 150
:|..|.|..|.|.|||||.|:||||..::|||||||||||..||||:|||
BPUM_1087___y 101 RLDHLNIQKDQIVYFGSLETSRAEKMIKEGLIVLDHSRYLTVEDYELEFE 150
BSNT_01938___ 151 AADWHEGRKAFEKLLQQFSIPQRETKNKILRFYEEKRKSI-- 190
.:|...|:.||..|||||.||.|.||||::||||||.|:.
BPUM_1087___y 151 VSDLEIGQTAFSALLQQFQIPVRNTKNKVVRFYEEKMKTQNR 192
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