Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01936 and BPUM_1086

See DNA alignment / Visit BSNT_01936 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:28
# Commandline: needle
#    -asequence pep-align/BSNT_01936.1.24716.seq
#    -bsequence pep-align/BPUM_1086___yjbJ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01936-BPUM_1086___yjbJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01936-BPUM_1086___yjbJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01936
# 2: BPUM_1086___yjbJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     121/261 (46.4%)
# Similarity:   158/261 (60.5%)
# Gaps:          22/261 ( 8.4%)
# Score: 528.5
# 
#
#=======================================

BSNT_01936         1 -MNVTNWAALLQLQALQSISNARSSSDTQNTE--SPLSSFSSLLSQYTNG     47
                      |||....:.:|||||:::.:....:..|..:  :..:||.|||..:..|
BPUM_1086___y      1 MMNVNQLQSFMQLQALKTLQSDPGQTQMQGGQESNAQASFQSLLQDFLGG     50

BSNT_01936        48 LTSQQSALSSSPSPLS-MLNSANTTAPS--------LLSAYGLNSYTSSN     88
                          |.||..|..:| .:.:..:|||:        .|||........:.
BPUM_1086___y     51 -----SELSRLPLSISAFMGTDPSTAPNTQYARTNPYLSAIAGGEELQAQ     95

BSNT_01936        89 SSSVTKAAESTETAAADSASNKHE---ANQISSGDFS--IDSAIKKAADK    133
                     .|....|..:|.....:..:|.:.   ...:|||..|  |:..:.:.|.|
BPUM_1086___y     96 PSFANDAQLNTANGIGNVLNNSYTPPLQKAVSSGSSSKEINQIVSQMAQK    145

BSNT_01936       134 YGVDEKLIRAVIKQESGFNAKAVSGAGAMGLMQLMPSTASSLGVSNPLDP    183
                     :||.||||.||||||||:...|||.|||:||||||||||.||||:|..|.
BPUM_1086___y    146 HGVPEKLIHAVIKQESGYRTNAVSHAGALGLMQLMPSTAKSLGVNNAFDA    195

BSNT_01936       184 QQNVEGGTKYLKQMLDKYGGNVSMALAAYNAGPGNVDRYGGIPPFQETKN    233
                     .||:||||||:||||.||.||||:||||||||.||||:|||||||:||:|
BPUM_1086___y    196 AQNIEGGTKYIKQMLQKYNGNVSLALAAYNAGSGNVDKYGGIPPFKETQN    245

BSNT_01936       234 YVKKITSAYYA    244
                     ||||||:.|:|
BPUM_1086___y    246 YVKKITAQYFA    256


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