Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01931 and BPUM_1083

See DNA alignment / Visit BSNT_01931 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:28
# Commandline: needle
#    -asequence pep-align/BSNT_01931.1.24716.seq
#    -bsequence pep-align/BPUM_1083.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01931-BPUM_1083.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01931-BPUM_1083.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01931
# 2: BPUM_1083
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 57
# Identity:      40/57 (70.2%)
# Similarity:    45/57 (78.9%)
# Gaps:           2/57 ( 3.5%)
# Score: 203.0
# 
#
#=======================================

BSNT_01931         1 MMSTLISIVCIAVFFCLNILGMMHMLPLYITSPLLFLSILFTLYRLNHRK     50
                     |.||.|.:|.|...|.|||||:|.|||||:||||||.:|||||||:||||
BPUM_1083          1 MRSTTIGLVFIGFCFFLNILGLMKMLPLYLTSPLLFAAILFTLYRMNHRK     50

BSNT_01931        51 TFKGF--     55
                     |||||  
BPUM_1083         51 TFKGFKG     57


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