Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01931 and BPUM_1083
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:28
# Commandline: needle
# -asequence dna-align/BSNT_01931.1.24716.seq
# -bsequence dna-align/BPUM_1083.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01931-BPUM_1083.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01931-BPUM_1083.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01931
# 2: BPUM_1083
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 183
# Identity: 116/183 (63.4%)
# Similarity: 116/183 (63.4%)
# Gaps: 24/183 (13.1%)
# Score: 353.5
#
#
#=======================================
BSNT_01931 1 ATGATGTCTA-------CTTTGATCTCAATTGTGTGCATTGCCGTTTTTT 43
|||..|| |.||| .|.||||.|.|||||.|.|.|.||
BPUM_1083 1 ---ATGCGTAGCACAACCATTG----GACTTGTTTTCATTGGCTTCTGTT 43
BSNT_01931 44 TCTGCTTGAATATCTTAGGCATGATGCATATGCTGCCGCTTTATATTACC 93
|||..||.||.||.||||||.|.|||.|.|||||.||.||||||.|.|||
BPUM_1083 44 TCTTTTTAAACATATTAGGCTTAATGAAAATGCTTCCTCTTTATCTCACC 93
BSNT_01931 94 TCTCCTCTGCTGTTT-CTGTCTATTTTGTTTACCCTCTACCGCTTGAATC 142
||.||.||..|.||| |.| |.||..|.|||||.||.||.||..||||.|
BPUM_1083 94 TCACCACTCTTATTTGCAG-CAATCCTTTTTACACTTTATCGAATGAACC 142
BSNT_01931 143 ACCGGAAAACCTTTAAAGGGTTTTAA------- 168
||.||||.|||||| |||||.|||||
BPUM_1083 143 ACAGGAAGACCTTT-AAGGGATTTAAAGGTTGA 174
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