Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01917 and BPUM_1073
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:27
# Commandline: needle
# -asequence pep-align/BSNT_01917___oppD.1.24716.seq
# -bsequence pep-align/BPUM_1073___oppD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01917___oppD-BPUM_1073___oppD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01917___oppD-BPUM_1073___oppD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01917___oppD
# 2: BPUM_1073___oppD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 364
# Identity: 251/364 (69.0%)
# Similarity: 297/364 (81.6%)
# Gaps: 19/364 ( 5.2%)
# Score: 1308.0
#
#
#=======================================
BSNT_01917___ 1 ----MTRLLEVKDLAISFKTYGGEVQAIRGVNFHLDKGETLAIVGESGSG 46
...:|:|.||.|||.|:.|||:|||||||.|.||||||||||||||
BPUM_1073___o 1 MMNKQETILKVNDLNISFHTFAGEVKAIRGVNFELKKGETLAIVGESGSG 50
BSNT_01917___ 47 KSVTSQAIMKLIPMPPGYFKRGEILFEGKDLVPLSEKEMQNVRGKEIGMI 96
|||||::||.|:|......|:|||||:.|:|..||:|:||.:|||:|.|:
BPUM_1073___o 51 KSVTSKSIMGLLPKSNSEVKKGEILFQDKNLTKLSDKQMQKIRGKDIAMV 100
BSNT_01917___ 97 FQDPMTSLNPTMKVGKQITEVLFKHEKISKEAAKKRAVELLELVGIPMPE 146
||||||||||||.:||||.|.:.||:..|||.|:|||:|||.|||||.||
BPUM_1073___o 101 FQDPMTSLNPTMTIGKQIIEPILKHQNASKEEARKRALELLSLVGIPKPE 150
BSNT_01917___ 147 KRVNQFPHEFSGGMRQRVVIAMALAANPKLLIADEPTTALDVTIQAQILE 196
:|..|:||:||||||||||:|:|||.|||:||||||||||||||||||||
BPUM_1073___o 151 QRFKQYPHQFSGGMRQRVVVAIALACNPKILIADEPTTALDVTIQAQILE 200
BSNT_01917___ 197 LMKDLQKKIDTSIIFITHDLGVVANVADRVAVMYAGQIVETGTVDEIFYD 246
|||||||||:||||||||||||||||||||||||.|||||.||||||||:
BPUM_1073___o 201 LMKDLQKKIETSIIFITHDLGVVANVADRVAVMYGGQIVEIGTVDEIFYN 250
BSNT_01917___ 247 PRHPYTWGLLASMPTLESSGEEELTAIPGTPPDLTNPPKGDAFALRSPYA 296
|:||||||||:|||:|::. ||:|.|||||||||.||||||.||.|:.||
BPUM_1073___o 251 PQHPYTWGLLSSMPSLDAK-EEKLFAIPGTPPDLLNPPKGDPFAARNQYA 299
BSNT_01917___ 297 MKIDFEQEPPMFKVSDTHYVKSWLLHPDAPKVEPPEAVKAKMR-----KL 341
|||||||:||:::||:|||..:|||||:||||||||::|.:|| |.
BPUM_1073___o 300 MKIDFEQQPPLYQVSETHYAATWLLHPNAPKVEPPESIKQRMRQFKAQKG 349
BSNT_01917___ 342 ANTFEKPVLVREGE 355
.:..|
BPUM_1073___o 350 GDHIE--------- 354
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