Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01916 and BPUM_1072
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:27
# Commandline: needle
# -asequence pep-align/BSNT_01916___oppC.1.24716.seq
# -bsequence pep-align/BPUM_1072___oppC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01916___oppC-BPUM_1072___oppC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01916___oppC-BPUM_1072___oppC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01916___oppC
# 2: BPUM_1072___oppC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 343
# Identity: 153/343 (44.6%)
# Similarity: 222/343 (64.7%)
# Gaps: 38/343 (11.1%)
# Score: 810.5
#
#
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BSNT_01916___ 1 -----MQNIPKNMFEPAAANAGDAEKISKKSLSLWKDAMLRFRSNKLAMV 45
.:||.|::||||..:...||||.|.||:.|:||.||.:.||.|:|
BPUM_1072___o 1 MMKQQEENIDKSLFEPAGVDTFSAEKIEKPSLNYWQDAWLRIKKNKAAVV 50
BSNT_01916___ 46 GLIIIVLIILMAIFAPMFSRYDYSTTNLLNADKPP--------------- 80
.|:|:.||:.|||..|:.|..|:||.....|:.||
BPUM_1072___o 51 SLVILFLIVFMAIVGPLISGKDFSTQTTSEANLPPRIQGLEHVSFLPFTG 100
BSNT_01916___ 81 ----------------SKDH--WFGTDDLGRDIFVRTWVGARISIFIGVA 112
..|| |||||:||||:|.|.|.|.:||:.|.|.
BPUM_1072___o 101 ERTLKSGDVVNPYEQKGIDHYYWFGTDNLGRDLFTRVWKGTQISLLIAVV 150
BSNT_01916___ 113 AAVLDLLIGVIWGSISGFRGGRTDEIMMRIADILWAVPSLLMVILLMVVL 162
|||:||:|||.:|:|||:.||:.|..|.|:.::|..:|:|::|||:::||
BPUM_1072___o 151 AAVIDLIIGVAYGAISGYFGGKIDNAMQRVLEVLMGIPNLIVVILMILVL 200
BSNT_01916___ 163 PKGLFTIIIAMTITGWINMARIVRGQVLQLKNQEYVLASQTLGAKTSRLL 212
..|:..||||::|||||:|||:||.||::||.||||||::|||....:::
BPUM_1072___o 201 KPGIIPIIIALSITGWISMARVVRAQVMKLKEQEYVLAARTLGLSNFKII 250
BSNT_01916___ 213 FKHIVPNAMGSILVTMTLTVPTAIFTEAFLSYLGLGVPAPLASWGTMASD 262
|||::||..|.:::....|:|:|||.|||||::|||:..|.||.||:..|
BPUM_1072___o 251 FKHMLPNLTGVMIINTMFTIPSAIFFEAFLSFIGLGLQEPQASLGTLIED 300
BSNT_01916___ 263 GLPALTYYPWRLFFPAGFICITMFGFNVVGDGLRDALDPKLRK 305
|..::..:|:::.:||..|.:.|..||:|.||:|||||||::.
BPUM_1072___o 301 GFKSMIAFPYQMVYPAIIISVIMIVFNLVADGVRDALDPKMKD 343
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