Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01909 and BPUM_1067

See DNA alignment / Visit BSNT_01909 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:26
# Commandline: needle
#    -asequence pep-align/BSNT_01909___yjbA.1.24716.seq
#    -bsequence pep-align/BPUM_1067___yjbA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01909___yjbA-BPUM_1067___yjbA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01909___yjbA-BPUM_1067___yjbA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01909___yjbA
# 2: BPUM_1067___yjbA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity:     214/250 (85.6%)
# Similarity:   229/250 (91.6%)
# Gaps:           0/250 ( 0.0%)
# Score: 1169.0
# 
#
#=======================================

BSNT_01909___      1 MLFLHDVWVNWFEGEENGYNVCHFHEWRKEDTVELLDQVPLLRVPSVLFH     50
                     |||||||||||||||||||||||||||||||:||||||||||:|.|.|:.
BPUM_1067___y      1 MLFLHDVWVNWFEGEENGYNVCHFHEWRKEDSVELLDQVPLLKVQSPLYD     50

BSNT_01909___     51 YIENDLSELPKGLLEDVHQKSYIRKNHERTKLEYCFVVTDGIGILAVDTI    100
                     |||||||||||.|||.|.:||||||||||.||||||||||||.|:|||||
BPUM_1067___y     51 YIENDLSELPKTLLESVFEKSYIRKNHERRKLEYCFVVTDGIRIIAVDTI    100

BSNT_01909___    101 GYTIPVRKSRLIPRQEQLVYEMVKDVEPETYEFEPKKLESSKEYHILSLA    150
                     ||:|||||||||||||||||||||||:.|.|||....||||||||||||.
BPUM_1067___y    101 GYSIPVRKSRLIPRQEQLVYEMVKDVKAEEYEFSQDSLESSKEYHILSLP    150

BSNT_01909___    151 PEHVRGLTRKERQIKQLMFMALDQLKGLKNRAEIGYWYTEWNPHMYEQIK    200
                     |:|:.||||||||:||||||||||||||:|||||.||||||||.||.|||
BPUM_1067___y    151 PQHISGLTRKERQLKQLMFMALDQLKGLQNRAEIAYWYTEWNPRMYNQIK    200

BSNT_01909___    201 RMSFEEIWDMLYNETIEGWSDKHLAFCENLIKGQPFFEKLWEMENESKVN    250
                     ||||||||:|||||||:|||:.||||||.:||||||||||||||||||||
BPUM_1067___y    201 RMSFEEIWNMLYNETIDGWSENHLAFCEKMIKGQPFFEKLWEMENESKVN    250


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.