Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01907 and BPUM_1064

See DNA alignment / Visit BSNT_01907 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:26
# Commandline: needle
#    -asequence pep-align/BSNT_01907___appC.1.24716.seq
#    -bsequence pep-align/BPUM_1064___appC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01907___appC-BPUM_1064___appC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01907___appC-BPUM_1064___appC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01907___appC
# 2: BPUM_1064___appC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     231/303 (76.2%)
# Similarity:   264/303 (87.1%)
# Gaps:           4/303 ( 1.3%)
# Score: 1223.0
# 
#
#=======================================

BSNT_01907___      1 MSELQTTPSPEIRLKENISKKPETMTKIFWGKFSKNKLAILGAVILFIII     50
                         ..||..:::|||.:..|||||.::|..||.|||||:.|:|||.|||
BPUM_1064___a      1 ----MGTPPVDLKLKEGLPPKPETMLRLFCEKFFKNKLAVAGSVILLIII     46

BSNT_01907___     51 MSAVFAPLIAPYPQEQQSLLDKYKAPGLEHLMGTDKFGRDIFSRILYGAR    100
                     .||:|||:||||..|||.||.:.:.|..||||||||||||||||:|||||
BPUM_1064___a     47 FSAIFAPVIAPYAPEQQDLLKRLQPPSAEHLMGTDKFGRDIFSRVLYGAR     96

BSNT_01907___    101 VSLLVGFASVVGSILIGTVLGALAGYFRGIVDAVIMRVVDIVLSIPDIFL    150
                     |||||||.||||:|.||||:||:||||:|.||:::||.||:|||||||||
BPUM_1064___a     97 VSLLVGFVSVVGAITIGTVVGAVAGYFKGFVDSLLMRFVDVVLSIPDIFL    146

BSNT_01907___    151 LITLVTIFKPGVDKLILIFCLTGWTTTARLVRGEFLSLRSREYVLAAKTI    200
                     |||||||||||:|||||||.||||||||||:|.||||||:||:||||:||
BPUM_1064___a    147 LITLVTIFKPGIDKLILIFALTGWTTTARLIRSEFLSLRTREFVLAARTI    196

BSNT_01907___    201 GTKTHKIIFSHILPNALGPIIVSATLKVGSVILAESALSYLGFGIQPPIA    250
                     |||.|.|||||||||.:|||||||||||||||||||.|||||||||||.|
BPUM_1064___a    197 GTKNHVIIFSHILPNCIGPIIVSATLKVGSVILAESTLSYLGFGIQPPTA    246

BSNT_01907___    251 SWGNMLQDAQNFTVMIQAWWYPLFPGLFILMTVLCFNFVGDGLRDALDPK    300
                     ||||||||||||::|:|||||||||||.||:|||||||:|||||||||||
BPUM_1064___a    247 SWGNMLQDAQNFSIMVQAWWYPLFPGLLILLTVLCFNFLGDGLRDALDPK    296

BSNT_01907___    301 NIK    303
                     .:|
BPUM_1064___a    297 KLK    299


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