Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01903 and BPUM_1060
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:25
# Commandline: needle
# -asequence pep-align/BSNT_01903___appD.1.24716.seq
# -bsequence pep-align/BPUM_1060___appD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01903___appD-BPUM_1060___appD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01903___appD-BPUM_1060___appD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01903___appD
# 2: BPUM_1060___appD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 328
# Identity: 254/328 (77.4%)
# Similarity: 288/328 (87.8%)
# Gaps: 2/328 ( 0.6%)
# Score: 1315.5
#
#
#=======================================
BSNT_01903___ 1 MSTLLEVNNLKTYFFRKKEPIPAVDGVDFHISKGETVALVGESGSGKSIT 50
|:|||||.|||||||||||.|||||||||.|::|||||||||||||||||
BPUM_1060___a 1 MTTLLEVQNLKTYFFRKKEAIPAVDGVDFSINRGETVALVGESGSGKSIT 50
BSNT_01903___ 51 SLSIMGLVQSSGGKIMDGSIKLEDKDLTSFTENDYCKIRGNEVSMIFQEP 100
|||||||:..:|||||||||||:.|||.::.|.:.|.||||:||||||||
BPUM_1060___a 51 SLSIMGLINGTGGKIMDGSIKLDGKDLVTYGEKELCNIRGNDVSMIFQEP 100
BSNT_01903___ 101 MTSLNPVLTIGEQITEVLIYHKNMKKKEARQRAVELLQMVGFSRAEQIMK 150
||||||||||||||||:|||||.:.||||.::|::||::|||||.|||:|
BPUM_1060___a 101 MTSLNPVLTIGEQITEILIYHKKLSKKEATKKAIDLLKLVGFSRPEQIIK 150
BSNT_01903___ 151 EYPHRLSGGMRQRVMIAIALSCNPKLLIADEPTTALDVTIQAQVLELMKD 200
:|||||||||||||||||||||:||||||||||||||||||||||.||||
BPUM_1060___a 151 DYPHRLSGGMRQRVMIAIALSCDPKLLIADEPTTALDVTIQAQVLTLMKD 200
BSNT_01903___ 201 LCQKFNTSILLITHDLGVVSEAADRVIVMYCGQVVENATVDDLFLEPLHP 250
||..|.|||||||||||||||.|||||||||||||||.||::||.:||||
BPUM_1060___a 201 LCTTFGTSILLITHDLGVVSEVADRVIVMYCGQVVENGTVEELFDQPLHP 250
BSNT_01903___ 251 YTEGLLTSIPVIDGEIDKLNAIKGSVPTPDNLPPGCRFAPRCPKAMDKCW 300
||||||.|||||||:|..|.||||:||.||.||.|||||||||:..::|.
BPUM_1060___a 251 YTEGLLESIPVIDGDIQPLAAIKGNVPAPDQLPAGCRFAPRCPQVKERCL 300
BSNT_01903___ 301 TNQPSLLTHKSGRTVRCFLYEEEGAEQS 328
...|.|.|.::||:|||||||| |:|:
BPUM_1060___a 301 GELPKLRTFENGRSVRCFLYEE--ADQT 326
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