Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01897 and BPUM_1056

See DNA alignment / Visit BSNT_01897 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:25
# Commandline: needle
#    -asequence pep-align/BSNT_01897___yjzB.1.24716.seq
#    -bsequence pep-align/BPUM_1056.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01897___yjzB-BPUM_1056.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01897___yjzB-BPUM_1056.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01897___yjzB
# 2: BPUM_1056
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 77
# Identity:      37/77 (48.1%)
# Similarity:    54/77 (70.1%)
# Gaps:           4/77 ( 5.2%)
# Score: 199.0
# 
#
#=======================================

BSNT_01897___      1 ---MDVFSRMMFGDAAKPTEEKEEQQEE-VSQTNDEKTINYMHIMDQIGS     46
                        .|:||.||||...:..:.|.|.:|| |..|:.|.:|:|||:|:|||:
BPUM_1056          1 MAQKDIFSAMMFGQPLEKEKSKTETKEERVETTSSEDSIDYMHVMNQIGN     50

BSNT_01897___     47 IMNSLDQIKPALKELAPMLSAIKKKIM     73
                     ||||:|::||..|::.||:||.|||:.
BPUM_1056         51 IMNSIDELKPVFKDVGPMISAFKKKLS     77


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