Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01896 and BPUM_1055

See DNA alignment / Visit BSNT_01896 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:25
# Commandline: needle
#    -asequence pep-align/BSNT_01896___comZ.1.24716.seq
#    -bsequence pep-align/BPUM_1055___comZ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01896___comZ-BPUM_1055___comZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01896___comZ-BPUM_1055___comZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01896___comZ
# 2: BPUM_1055___comZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 65
# Identity:      46/65 (70.8%)
# Similarity:    58/65 (89.2%)
# Gaps:           2/65 ( 3.1%)
# Score: 236.5
# 
#
#=======================================

BSNT_01896___      1 MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEA     50
                     ||||||:|||||||||.|:|||:|:|:||:|..||:||.::|||:||.||
BPUM_1055___c      1 MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLEPEALQPLLSLFTSVMQEA     50

BSNT_01896___     51 YELGKSDAKSE--TE     63
                     |||||:||:||  ||
BPUM_1055___c     51 YELGKADAESEKATE     65


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.