Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01896 and BPUM_1055
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:25
# Commandline: needle
# -asequence dna-align/BSNT_01896___comZ.1.24716.seq
# -bsequence dna-align/BPUM_1055___comZ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01896___comZ-BPUM_1055___comZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01896___comZ-BPUM_1055___comZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01896___comZ
# 2: BPUM_1055___comZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 205
# Identity: 141/205 (68.8%)
# Similarity: 141/205 (68.8%)
# Gaps: 20/205 ( 9.8%)
# Score: 471.5
#
#
#=======================================
BSNT_01896___ 1 ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCT 50
|||||||||||||||||..|.||.||.||.||||||||||||||.|||.|
BPUM_1055___c 1 ATGCAGCACGAAAAATCGATGGAGTTTTTACAAATTGCCATGAAGTATTT 50
BSNT_01896___ 51 CCCTGAAGCGAAAGAACAGCTTGAGAAATCAGGCATTGAGCTCTCAATG- 99
.||..||||.||||||.|..|.||.|||.||||.|||.|||| ||
BPUM_1055___c 51 TCCGCAAGCAAAAGAAGAATTAGATAAAGCAGGTATTCAGCT-----TGA 95
BSNT_01896___ 100 ----GAGGCCATCCAGCCG--TTTATGAATCTATTTACAACGGTAATGGC 143
||.||..|.|||||| |||||.| .|.||||||.|.||.|||..
BPUM_1055___c 96 GCCTGAAGCTCTTCAGCCGCTTTTATCA--TTGTTTACATCTGTTATGCA 143
BSNT_01896___ 144 GGAAGCTTATGAGCTTGGCAAGTCTGACGCTAAATCTGAA------ACAG 187
.||.||.|||||||||||.||..|.||.||..||||.||| ||||
BPUM_1055___c 144 AGAGGCATATGAGCTTGGAAAAGCAGATGCAGAATCAGAAAAAGCCACAG 193
BSNT_01896___ 188 AATAA 192
||||.
BPUM_1055___c 194 AATAG 198
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