Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01894 and BPUM_1054

See DNA alignment / Visit BSNT_01894 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:25
# Commandline: needle
#    -asequence pep-align/BSNT_01894___med.1.24716.seq
#    -bsequence pep-align/BPUM_1054___med.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01894___med-BPUM_1054___med.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01894___med-BPUM_1054___med.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01894___med
# 2: BPUM_1054___med
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 320
# Identity:     202/320 (63.1%)
# Similarity:   254/320 (79.4%)
# Gaps:           3/320 ( 0.9%)
# Score: 1087.0
# 
#
#=======================================

BSNT_01894___      1 -MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYK     49
                      ...|||||||.|||||.|.:.|.||:|||||:|.||||||.||||||||
BPUM_1054___m      1 MKYQRLVMIFSFLLLLSACSQAPLKGQIEKVGLLVPDTINDQVWGTKGYK     50

BSNT_01894___     50 GLLNIQSKYNVDVYYKEGVKTEEDIINAIEDFHKRGVNLLYGHGSEYAEV     99
                     |||||||.:.||||||||:..:|.|::|||:|||:||||:.||||||:|:
BPUM_1054___m     51 GLLNIQSTFGVDVYYKEGMVDKEKIVDAIEEFHKKGVNLIIGHGSEYSEI    100

BSNT_01894___    100 FNLVGEDYPDMEFVISNA-KAKADNVTSVHFSGEAMGFFGGMTAAHMSKT    148
                     |||:.||||..:|:..|. |.:||||.:|.|.||||||||||||||||||
BPUM_1054___m    101 FNLISEDYPKTQFITVNGNKPQADNVANVTFKGEAMGFFGGMTAAHMSKT    150

BSNT_01894___    149 NQVGVIASFTWQPEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQ    198
                     .::|::|::.||.|||||||||||::..::|..::.::|||...||:|||
BPUM_1054___m    151 KKIGILATYDWQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQ    200

BSNT_01894___    199 KMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDLGENTVLTS    248
                     |:|.:|.|||||||||||:|||:|||.|.|.|||||||||:||.:|||||
BPUM_1054___m    201 KLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQSNLGSHTVLTS    250

BSNT_01894___    249 TVQNVDKAYEIIAEQFNKGTL-EGGDHYYDLNTGVVEMGTFSPLVDKDFQ    297
                     |||:|||||.|||::||:|.| |.|::.:|...||:|||.||..:|:.|.
BPUM_1054___m    251 TVQHVDKAYSIIAKKFNEGKLNEQGEYSFDFKEGVIEMGKFSSTIDRAFL    300

BSNT_01894___    298 QRIAKLIKTYNKTGELPKNE    317
                     :.|...|.||.|||:||..:
BPUM_1054___m    301 KDIESDIATYKKTGKLPNEK    320


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