Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01892 and BPUM_1053
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:25
# Commandline: needle
# -asequence pep-align/BSNT_01892.1.24716.seq
# -bsequence pep-align/BPUM_1053___yjaV.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01892-BPUM_1053___yjaV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01892-BPUM_1053___yjaV.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01892
# 2: BPUM_1053___yjaV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 200
# Identity: 81/200 (40.5%)
# Similarity: 118/200 (59.0%)
# Gaps: 24/200 (12.0%)
# Score: 348.0
#
#
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BSNT_01892 1 MESTLIVGADEFFGLSLCERMMDEGIHVDVVLAETEDKMRQMYLEERLMW 50
||:.||:||||||||:|||.||.||:|||:.....:.|.::|.||||:||
BPUM_1053___y 1 METGLIIGADEFFGLALCEYMMKEGMHVDITCPHHQTKEQKMLLEERMMW 50
BSNT_01892 51 LGRNELFRQLE-HIGDQNYDTICIQFGSFLP------LDQCDSPYILVYE 93
||||:|||.:: ..|...||.|.|| |..| |......|.::||
BPUM_1053___y 51 LGRNDLFRVIDLQDGKDTYDLIFIQ--SEEPDKRQEGLKAAHGIYRVLYE 98
BSNT_01892 94 EDRKEWEKREKTGSEK--TVILPKMYGPW---KEETE-EDGYYTNDVADE 137
:.::|:.::. .||||:|:||| ||.|: |:.::..|||.:
BPUM_1053___y 99 ------KTKDKSSNQNVPVVILPRMFGPWTIDKERTKREEAFFVEDVARD 142
BSNT_01892 138 LLRFLLEPSRHSKDQLFELQVTEKTSKEEAKTKIIEWKRQFSSIFDKY-- 185
|..: ...:...::...||:|..:|..::|:..|.|||||.|:.|||.
BPUM_1053___y 143 LFNW-ASGAEQRQEITHELKVERQTDDKQAEEMIAEWKRQNSTFFDKKQE 191
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