Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01890 and BPUM_1052

See DNA alignment / Visit BSNT_01890 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:25
# Commandline: needle
#    -asequence pep-align/BSNT_01890___yjaU.1.24716.seq
#    -bsequence pep-align/BPUM_1052___yjaU.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01890___yjaU-BPUM_1052___yjaU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01890___yjaU-BPUM_1052___yjaU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01890___yjaU
# 2: BPUM_1052___yjaU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity:     146/246 (59.3%)
# Similarity:   185/246 (75.2%)
# Gaps:           2/246 ( 0.8%)
# Score: 790.5
# 
#
#=======================================

BSNT_01890___      1 MGITERYFQLGTEHNVIHLPYRPNGFGIFILGDRTHFVGHDSSFWQQHYG     50
                     ||::||:||||::.||||||.:||||||.|||||.|||..::|||.||||
BPUM_1052___y      1 MGVSERFFQLGSQWNVIHLPQKPNGFGILILGDRNHFVQENTSFWLQHYG     50

BSNT_01890___     51 RNQLLSMLRNEGYTLFNSNLFGRHWGAEKAVTYAKQLIHSVLKQEILNPK    100
                     |||||:.|::||||||||:|.|.|||.|.||..||||:|..|||||||.:
BPUM_1052___y     51 RNQLLTALKDEGYTLFNSHLHGNHWGCEDAVFSAKQLVHHTLKQEILNRE    100

BSNT_01890___    101 IHILAEGMGALVADELLRFSPDHIRSAAMLNPCLDLQAHYESEKENKFFY    150
                     ||:||||||||||..|....|:.:||.|::||||.|.|..|.|||:||||
BPUM_1052___y    101 IHVLAEGMGALVAMSLAEEMPEVLRSIALVNPCLHLHAQREREKEHKFFY    150

BSNT_01890___    151 KQFLKEVSKSYGISEKEAEALRYKTIQSYPSGVPVHIWQRMTGAPYPYSV    200
                     ||.:||::|||..||||||.........:.:.||:|||||:.||||.|.:
BPUM_1052___y    151 KQLIKELAKSYDCSEKEAETYPLPACPYHSAHVPIHIWQRLNGAPYAYEL    200

BSNT_01890___    201 HAEVFKEKQQK--QGSPVDMTFHLFEHPSRIYASICKFFHSHEKEL    244
                     ||:.|.::..|  :...:|:|.|:|:||.||:.||.||:.|||:||
BPUM_1052___y    201 HAKPFIDQHMKNPEHCQIDLTLHMFDHPRRIFQSIHKFYKSHEREL    246


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