Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01882 and BPUM_1045
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:24
# Commandline: needle
# -asequence pep-align/BSNT_01882___argD.1.24716.seq
# -bsequence pep-align/BPUM_1045___argD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01882___argD-BPUM_1045___argD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01882___argD-BPUM_1045___argD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01882___argD
# 2: BPUM_1045___argD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 385
# Identity: 273/385 (70.9%)
# Similarity: 320/385 (83.1%)
# Gaps: 2/385 ( 0.5%)
# Score: 1433.0
#
#
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BSNT_01882___ 1 MSSLFQTYGRWDIDLKKAKGTYVEDQNGKSYLDFIQGIAVSNLGHCHEAV 50
||.||||||||::::|:|.|::..|.|||.||||||||||:||||.|..|
BPUM_1045___a 1 MSHLFQTYGRWNVEIKEAAGSWAVDTNGKKYLDFIQGIAVTNLGHNHPKV 50
BSNT_01882___ 51 TEAVKKQLDSVWHVSNLFQNSLQEQAAQKLAAHSAGDLVFFCNSGAEANE 100
.:|:|||||.||||||||:|.|||:||:||||:|:|||||||||||||||
BPUM_1045___a 51 NQAIKKQLDHVWHVSNLFENGLQEKAAEKLAANSSGDLVFFCNSGAEANE 100
BSNT_01882___ 101 GAIKLARKATGKTKIITFLQSFHGRTYAGMAATGQDKIKTGFGPMLEGFH 150
|||||||||||||.|:|||.||||||||||||||||||||||||||||||
BPUM_1045___a 101 GAIKLARKATGKTNIVTFLHSFHGRTYAGMAATGQDKIKTGFGPMLEGFH 150
BSNT_01882___ 151 YLPYNDPSAFKALGEEGDIAAVMLETVQGEGGVNPASAEFLSAVQSFCKE 200
|:|:|||.|..|. |.|::||||||.||||||||||:.|||.|||:||::
BPUM_1045___a 151 YVPFNDPEAIAAC-EVGNVAAVMLEVVQGEGGVNPATTEFLEAVQAFCQK 199
BSNT_01882___ 201 KQALLIIDEIQTGIGRTGKGFAYEHFGLSPDIITVAKGLGNGFPVGAVIG 250
.:||||:|||||||||||..||||..||.||||:.|||||||||||||||
BPUM_1045___a 200 HEALLIVDEIQTGIGRTGTAFAYEQTGLDPDIISSAKGLGNGFPVGAVIG 249
BSNT_01882___ 251 KKQLGEAFTPGSHGTTFGGNMLAMAAVNATLQIVFQPDFLQEAADKGAFL 300
||.||:||:||||||||||||||||||||||.::|:.:||.|..:|||:|
BPUM_1045___a 250 KKALGDAFSPGSHGTTFGGNMLAMAAVNATLDVIFKDEFLTEVKEKGAYL 299
BSNT_01882___ 301 KEQLEAELKSPFVKQIRGKGLMLGIECDGPVADIIAELQTLGLLVLPAGP 350
.|:|:...:...||::||||||.|:||..||.|.|..|:..|||||||||
BPUM_1045___a 300 LEKLQDLKQLNIVKEVRGKGLMAGVECHQPVGDYITALREQGLLVLPAGP 349
BSNT_01882___ 351 NVIRLLPPLTVTKDEIAEAVSKLKQAIAHHSAVNQ 385
|||||||||.|.|.||.:|:..|.|.:|:.:...
BPUM_1045___a 350 NVIRLLPPLNVEKAEIDQAIDALTQVLANETVTV- 383
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