Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01879 and BPUM_1042
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:23
# Commandline: needle
# -asequence pep-align/BSNT_01879___argC.1.24716.seq
# -bsequence pep-align/BPUM_1042___argC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01879___argC-BPUM_1042___argC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01879___argC-BPUM_1042___argC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01879___argC
# 2: BPUM_1042___argC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 347
# Identity: 242/347 (69.7%)
# Similarity: 282/347 (81.3%)
# Gaps: 2/347 ( 0.6%)
# Score: 1287.0
#
#
#=======================================
BSNT_01879___ 1 --MKIGIVGATGYGGTELVRILSHHPHAEECILYSSSGEGNVYSEGYPHL 48
:||||:|||||||.|||||...|||.||||||||||:|.:||:.||||
BPUM_1042___a 1 MTLKIGIIGATGYGGAELVRIFKQHPHVEECILYSSSGDGQLYSQSYPHL 50
BSNT_01879___ 49 TGLADQQLKPIDMNTIKHEIDIMFLAAPPGVSSELTPKLADAGIPVIDLS 98
|.:.||.||.||...|..|.|.:|||.|.||||||||||.:.|:|:||||
BPUM_1042___a 51 TTITDQTLKAIDPAAIVRETDAVFLATPAGVSSELTPKLMNQGVPIIDLS 100
BSNT_01879___ 99 GDLRIQEPAEYEKWYKRTAAPKAVIQEAVYGLAELNQLQIQQAKLIANPG 148
||||||:.|.||.||||.||.::.:|:|||||:|||:..|::|::|||||
BPUM_1042___a 101 GDLRIQDGATYEAWYKRRAADQSSVQQAVYGLSELNRETIEKAEVIANPG 150
BSNT_01879___ 149 CFPTAVLLGLAPLAQKKLLDESFVIVDAKTGVSGAGRKASMGTHFSELNG 198
|||||||||||||.::.|:|||.:|:|||||||||||.||:||||||||.
BPUM_1042___a 151 CFPTAVLLGLAPLMKQNLIDESMIIIDAKTGVSGAGRSASLGTHFSELND 200
BSNT_01879___ 199 NFKIYKVNEHQHTPEIEQALNEWQPGLGPITFSAHLVPMTRGIMATMYTR 248
||||||||||||||||||.|.||.|....||||.|||||||||||||||:
BPUM_1042___a 201 NFKIYKVNEHQHTPEIEQILREWNPQTANITFSTHLVPMTRGIMATMYTQ 250
BSNT_01879___ 249 LTCDLSADDLHDLYSEFYQDSYFVRVRPKGQYPQTKEVYGSNFCDIAVTL 298
|..|::.::|......||:||||||||....||||:||||||||||...|
BPUM_1042___a 251 LKSDITKEELMKHMKGFYEDSYFVRVRDHEVYPQTREVYGSNFCDIGFHL 300
BSNT_01879___ 299 DERTNRVTIVSVIDNLMKGAAGQAVQNFNLMNGWNEETGLTITPIYP 345
||||.|:||||||||||||||||||||||::.|.:||.|||:||:||
BPUM_1042___a 301 DERTGRLTIVSVIDNLMKGAAGQAVQNFNIIKGLDEEAGLTMTPLYP 347
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