Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01877 and BPUM_1041
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:23
# Commandline: needle
# -asequence pep-align/BSNT_01877.1.24716.seq
# -bsequence pep-align/BPUM_1041___yitZ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01877-BPUM_1041___yitZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01877-BPUM_1041___yitZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01877
# 2: BPUM_1041___yitZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 182
# Identity: 72/182 (39.6%)
# Similarity: 87/182 (47.8%)
# Gaps: 64/182 (35.2%)
# Score: 371.0
#
#
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BSNT_01877 1 MGKNKLKWLTLSQSSVFFASSLIFPFYILFVKNIGSSYTQFGFSYGLFGL 50
|....:||...|||.:||||||||||||||:||:||||:|||.:||||||
BPUM_1041___y 1 MNAKAMKWFVYSQSLLFFASSLIFPFYILFIKNVGSSYSQFGLAYGLFGL 50
BSNT_01877 51 SGALIYPLLGRLSERFDSRYFLLLNSWGMAVLLLYVPHIGSVVQVYIVQV 100
|||.|:.|||:|.|..|.|.||:::|:|||.|||..|||..|.|||::|:
BPUM_1041___y 51 SGAFIHLLLGKLPETTDRRLFLIIHSFGMAFLLLLFPHITEVEQVYMIQL 100
BSNT_01877 101 LLGLFGAMQKHGEKSADR-------------------------------- 118
.||..|..||||||....
BPUM_1041___y 101 ALGALGGFQKHGEKLLVTELTTENKRMKEVGRYHFWTALFSSIAIMLGGL 150
BSNT_01877 118 -------------------------------- 118
BPUM_1041___y 151 FADFFTVYFIFYASSILYLCSALIVIMMKYER 182
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