Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01871 and BPUM_1039

See DNA alignment / Visit BSNT_01871 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:23
# Commandline: needle
#    -asequence pep-align/BSNT_01871___yitW.1.24716.seq
#    -bsequence pep-align/BPUM_1039___yitW.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01871___yitW-BPUM_1039___yitW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01871___yitW-BPUM_1039___yitW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01871___yitW
# 2: BPUM_1039___yitW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 102
# Identity:      88/102 (86.3%)
# Similarity:    98/102 (96.1%)
# Gaps:           0/102 ( 0.0%)
# Score: 475.0
# 
#
#=======================================

BSNT_01871___      1 MEEALKENIMGALEQVVDPELGVDIVNLGLVYDVDMDEDGLTHVTMTLTS     50
                     |:|:|||||:||||||:||||.|||||||||||||:||:|...:||||||
BPUM_1039___y      1 MDESLKENILGALEQVIDPELNVDIVNLGLVYDVDLDENGKADITMTLTS     50

BSNT_01871___     51 MGCPLAPIIVDEVKKALADLPEVKDTEVHIVWNPPWTRDKMSRYAKIALG    100
                     |||||||:|||||||||:||||||:|||||||||||||||||||||||||
BPUM_1039___y     51 MGCPLAPVIVDEVKKALSDLPEVKETEVHIVWNPPWTRDKMSRYAKIALG    100

BSNT_01871___    101 IQ    102
                     ||
BPUM_1039___y    101 IQ    102


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.